Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01489 ATGGCTTCCCACATTGCTCTTCTTCGTGCCCCTCCTCTCTCAATTTCCACTCAACGCTTCCATGCCAAACAGACTTGCTTAAACGGACTCAGATTCACCACCACCACCACCACCACCACCACCACCACCACCACCACTTCTTCTTCTTCTTGCTTTCCATGCTCCATAACAACACAAAGAGGGTCTTTTTCCTCTGTAATTGCATGTTCCTCTTCAAATGGAAGAGACCCAGGTTCGGAGGATGATGAAGAGGTACGGAAGAAGCTCATTCTCGAAGAGAAACGACGAGCTGCATTGTCTGCGAGGATTGCCTCAGGGGAATTCACCGTGAAGCAGAAATCTGTTTTGCTTTCTATAGTGGAGGGATTGGCAAAGGTGGGGGTGCCCAATGAAATTCTGGATTTTTTGTTTGGTTGGGTTGAAGGGGGTGGTGTGTACGCCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCTGTTCGAAGTGTGGCCTTCTTCATTCCTCTGTATGAACTTTACCTCACATATGGTGGGATTTTTAGGTTGACATTTGGACCAAAGTCCTTTCTGATAGTATCTGATCCGACTATTGCAAAACACATATTGAAAGACAATTCAAAGGCTTATTCAAAGGGCATCTTGGCTGAGATACTAGACTTTGTAATGGGGAAAGGTCTCATCCCAGCTGATGGTGAAATATGGCGAGTTAGACGCCGTGCTATAGTCCCAGCATTGCATCAGAAGTACGTAGCAGCTATGATTGGCCTTTTTGGACAAGCTGCAGATAGGCTCTGCCAGAAGCTAGATGCTGCTGCATCCGATGGAGAAGATGCTGAGATGGAATCACTTTTCTCTCGATTGACCTTGGACATCATTGGAAAGGCAGTATTCAATTATGATTTTGATAGTTTATCGAATGACACTGGTATAGTTGAGGCTGTTTATACCGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCAGTATGGGATATCCCAATATGGAAAGATGTATCACCACGTTTAAGGAAGGTTAATGAAGCTCTCAAATTGATCAATAATACGCTTGATGATCTGATAGCAATATGCAAGAGAATAGTGGATGAAGAAGAGCTACAGTTTCATGAGGAGTACATGAATGAAAAAGATCCAAGTATTCTACACTTCTTGTTAGCGTCAGGAGATGATGTGTCAAGTAAGCAACTTCGTGATGACTTAATGACCATGCTCATTGCTGGGCATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTATCCAAGGAGCCTAGAGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGAGATAGATATCCAACTATTGAAGACATGAAGAAACTCAAATACACAACCCGAGTGATCAATGAGTCATTGAGGCTTTATCCACAACCACCTGTGTTAATTCGTCGCTCTCTTGAGGATGATGTTCTTGGAGAGTACCCAATAAAGAGAGGTGAAGATATATTTATATCTGTCTGGAACCTGCATCGCAGTCCAAAACTGTGGGATGACGCTGACAAGTTTGAACCTGAAAGATGGCCATTAGATGGACCAAACCCTAACGAGACGAATCAAAGCTTCAAATATCTTCCGTTTGGTGGAGGACCACGGAAGTGTGTAGGTGATTTGTTTGCTACATACGAGACTGTAGTAGCACTTGCAATGCTTGTTAGACGGTTCAACTTCCAAATGGCAGTTGGAGCTCCACCTGTTGAGATGACTACTGGAGCTACAATTCATACGACACAAGGGCTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTGCCCTCATTACAGATGTCAACTTTGGAAGTGGATCCATCCATTAGTCTTGCTGATCAGGATGAAATAAGTCAGAAAGGACAAGTTTATCAGGCTCAGGCTCAGGCTCAGCCCTAA 1947 0.4371 MASHIALLRAPPLSISTQRFHAKQTCLNGLRFTTTTTTTTTTTTTTSSSSCFPCSITTQRGSFSSVIACSSSNGRDPGSEDDEEVRKKLILEEKRRAALSARIASGEFTVKQKSVLLSIVEGLAKVGVPNEILDFLFGWVEGGGVYAKIPEAKGSIKAVRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPTIAKHILKDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIGLFGQAADRLCQKLDAAASDGEDAEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVAPIPVWDIPIWKDVSPRLRKVNEALKLINNTLDDLIAICKRIVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVMSKLQEEVDSVLGDRYPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEDDVLGEYPIKRGEDIFISVWNLHRSPKLWDDADKFEPERWPLDGPNPNETNQSFKYLPFGGGPRKCVGDLFATYETVVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSISLADQDEISQKGQVYQAQAQAQP* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01489 648 FunFam Carotene epsilon-monooxygenase, chloroplastic 150 607 - -
Lapu1g01489 648 CDD CYP97 166 599 - -
Lapu1g01489 648 Pfam Cytochrome P450 170 588 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PANTHER CYTOCHROME P450 FAMILY 4 168 605 - -
Lapu1g01489 648 PRINTS P450 superfamily signature 543 552 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS P450 superfamily signature 552 563 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS P450 superfamily signature 413 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 545 554 IPR017972 GO:0005506|GO:0016705
Lapu1g01489 648 PRINTS E-class P450 group I signature 402 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS E-class P450 group I signature 504 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS E-class P450 group I signature 422 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS E-class P450 group I signature 552 575 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS E-class P450 group I signature 542 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS E-class P450 group I signature 286 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS E-class P450 group I signature 464 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 PRINTS E-class P450 group I signature 172 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 SUPERFAMILY Cytochrome P450 163 605 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01489 648 Gene3D Cytochrome P450 152 611 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01489 Lapu-Chr1 27689234 27695921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01489 74 618 Cytochrome P450 AT1G31800 79.855 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01489 K15747 - gmx:100780770 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01489 1 27689234 27695921 Lapu1g01489 1 27689234 27695921 ECH