Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01480 ATGGTTTCCCTGTCAACCACCACCCCCTTTCTACCCTTCACTGCACAAAACGCTTCCACCAGAATCCCTCCTCCCAATTCCTTCCGTTACAGCAAGCAACATGATAGGGATCACAGGAAGGTTGTCTGCGCCTGCATCGCGCCTCCGCAGAACTTCAAGAGCCAGGACTCTTCCCCTATTAATTTCAATGGTTTGCACAAATCAGAACAGCTGAGCGGGGCGCGGGATCGGGATGATGATTCGGATGTTCTTATTGAATGTAGAGACGTGTACAAATCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGTCCATCTGGGACTGGTAAATCCACAGTTTTGAAGATTATAGCAGGACTTCTTGCTCCGGACAAGGGGGAAGTTTACATTCGAGGAAAAAAGAGGGTTGGTTTAGTAAGCGATGATGACATATCTGGTCTTCGGATTGGATTAGTTTTCCAAAGTGCCGCACTCTTTGATTCTTTGACCGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCGAGCATGTCTGAGGACCAAATATCAGAGCTTGTCAAGGAAACCTTGGCTGCAGTTGGATTGAAGGGAGTTGAAGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATCTGTGACACCACAAAGGAATCAATAGAGCCAGAGGTGCTTTTATATGACGAACCAACTGCTGGACTTGATCCTATTGCATCTACTGTTGTTGAGGATCTGATTCGCTCTGTGCACATAAAAGGACGAGATGCTCGTGGAAAACCTGGGAATATTGCTTCTTATGTAGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAGGGAACGATTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCAACAAATCCTATTGTTCAGCAGATGTATTGTCCCGTGAGAGAGTGCACCCTGGTTCACATTATTTGA 1044 0.4406 MVSLSTTTPFLPFTAQNASTRIPPPNSFRYSKQHDRDHRKVVCACIAPPQNFKSQDSSPINFNGLHKSEQLSGARDRDDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVKETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDARGKPGNIASYVVVTHQHSTIKRAIDRLLFLHKGTIVWEGMTHEFTTSTNPIVQQMYCPVRECTLVHII* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01480 347 SMART AAA_5 109 313 IPR003593 GO:0016887
Lapu1g01480 347 CDD ABC_Org_Solvent_Resistant 85 333 - -
Lapu1g01480 347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 336 IPR003439 GO:0005524
Lapu1g01480 347 Pfam ABC transporter 100 255 IPR003439 GO:0005524
Lapu1g01480 347 Gene3D - 72 338 IPR027417 -
Lapu1g01480 347 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Lapu1g01480 347 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 17 334 - -
Lapu1g01480 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01480 Lapu-Chr1 27612996 27621484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01480 84 334 Calmodulin-binding Proteins AT2G36910 28.302 8.96e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01480 - - vum:124836515 640.188