Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01468 ATGCTTCCAAATTCTCAGGCTGTGCCATCATCTCCCACCACGGGCAGTTTCTTCATGATGCCACCTCTAGCTCAGGAAACTAATCCATTGCTTCCTCCCTATTCTGCTCCTCTGAATCAGGTTTCTAGTAATTTCCACTCGGTAAAGGGAGGAAATAGAGAAAGCCAACTACTTGCTCAAGTTCAGTCACCATTAGATTTTTCATTCCCAGCAGATTTTTCAAAAGGCCATTCTATGAAAAATAGTGAAGTGAATTCATACAATGATATGAAAATGGTAAATGATGCGATTGTTAATGCCAATAATGTTGAGATGCCAATGTCTGGCTCTGAAGAAGTAAGCGATGAAAGCCCTGTGCCGAAAAATGCTATCAATGGTGAGGATATTGGAGGGCAGCTTGCTTCAGAAGGAGAACTGAAAGAAGCATCTCATGCAACAGGAGTGGTGAGAACCTCAGAGGATGGCTATAATTGGAGAAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAACCTAATTGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGATGGCCAAATTACAGAAATTATTTACAAGGGTAATCATAACCACGTAAAACCACACTCTAGTCATAGAGTATCTGCACTTACTTCTGATGAGGTTTCAGACATGGCTGAAGATGCTGCATTAGCTAAAGTTGATGGTGGGTTCATGTGGAGAAATATTCAGTCTGGACTAAAAGATTCAAAAAGCAGTTTAGATTGGAAGGCTGATGGTCAGGAAAGGACATCGTCAACTTCTGTTGTGACTGAGATTTCAGATCCTATACCAACCAACAAAGCTAAATCTCTATCTATGTTTGAATCGGAGGAGACTCCAGAGCTTACTTCTACACTTGCTAGTCATGATATGGAAGAAGATGGAGCCACACAAGCAATTGCGATGGTTGAAGATGAAGCTGAGAATGATGAATCGGAACCTAAAAGAAGGAAGAAAGAGAGCTATGCAGCTGAATCAAATTTGCCCCCTAGGTCTGTTCGTGAGCCAAGAGTGGTAGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGATATCGCTGGCGTAAGTATGGACAGAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCTGGATGTATGGTAAGGAAACATGTGGAAAGGGCCTCACACAATCTAAAATTTGTCCTTACTACTTATGAGGGAAAGCACAATCATGAAGTGCCCAGTGCAAGAACCAACAATCAGATAAACTCAAGTGATGGTGGTTTACCCCCTAATGGTGTCAATGGACAAGTGGCTCTTGCTTTACCAGGGAGTGCTGGCATTAAGGCTGAAACTCATCAAACTCTTGCACATCATTTTGATAGAAAACCTGAATTCAGCAATGAGTTTCTCAGGCCCAGTTTGATTGGAAGTTTCAGCAATGACATGAAGTTTGGTCCTTCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAGTAACACCATGCCTTATTGCTCCTATGGACTGAACCCTGATCGTTGTGCTGCCCCTCAAGCTGGATCCATTGCCTCAATGTTCCCTGATTTTCCAATGCCACTACCTTTGAATCTTCCCTCATCTGGAAAATTTTCAATTGCTGGACTTAATTTTAACTGTGCAAAACCTCTGACTCCTATCCAATCTTTCCTTTCTGGGCAGCAAGTGAAGGATATTGATACAGTATTCCTGAGGCCTAAGCAAGAACAAAAGGATGATACTATATACGGCTCGTGCATTCCCTCACTAGATGTTGCAAATGCTTCACTCACTTCTTCTTCAGCAGCACCATCCATTTATCAACGTGTCATGCAAAATTTCCCTTCATAA 1902 0.418 MLPNSQAVPSSPTTGSFFMMPPLAQETNPLLPPYSAPLNQVSSNFHSVKGGNRESQLLAQVQSPLDFSFPADFSKGHSMKNSEVNSYNDMKMVNDAIVNANNVEMPMSGSEEVSDESPVPKNAINGEDIGGQLASEGELKEASHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGNHNHVKPHSSHRVSALTSDEVSDMAEDAALAKVDGGFMWRNIQSGLKDSKSSLDWKADGQERTSSTSVVTEISDPIPTNKAKSLSMFESEETPELTSTLASHDMEEDGATQAIAMVEDEAENDESEPKRRKKESYAAESNLPPRSVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKFVLTTYEGKHNHEVPSARTNNQINSSDGGLPPNGVNGQVALALPGSAGIKAETHQTLAHHFDRKPEFSNEFLRPSLIGSFSNDMKFGPSSLCQMKYPSLSNTMPYCSYGLNPDRCAAPQAGSIASMFPDFPMPLPLNLPSSGKFSIAGLNFNCAKPLTPIQSFLSGQQVKDIDTVFLRPKQEQKDDTIYGSCIPSLDVANASLTSSSAAPSIYQRVMQNFPS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01468 633 Pfam WRKY DNA -binding domain 367 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 Pfam WRKY DNA -binding domain 153 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 Gene3D WRKY domain 353 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 FunFam WRKY transcription factor 57 352 426 - -
Lapu1g01468 633 MobiDBLite consensus disorder prediction 253 301 - -
Lapu1g01468 633 SMART WRKY_cls 152 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 SMART WRKY_cls 366 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 MobiDBLite consensus disorder prediction 262 301 - -
Lapu1g01468 633 MobiDBLite consensus disorder prediction 322 347 - -
Lapu1g01468 633 SUPERFAMILY WRKY DNA-binding domain 150 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 Gene3D WRKY domain 140 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 MobiDBLite consensus disorder prediction 326 341 - -
Lapu1g01468 633 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 447 IPR044810 GO:0003700
Lapu1g01468 633 ProSiteProfiles WRKY domain profile. 361 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 SUPERFAMILY WRKY DNA-binding domain 359 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 ProSiteProfiles WRKY domain profile. 147 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01468 633 FunFam WRKY transcription factor 140 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01468 Lapu-Chr1 27500509 27504164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01468 152 429 WRKY Transcription Factor Family AT5G56270 53.061 1.08e-85 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu1g01468 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01468 K18835 - gmx:100800211 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01468 1 27500509 27504164 Lapu1g01468 1 27500509 27504164 ECH