Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01462 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCACTTCACCTTCTCCGTCTTTCAGGAAGCGCAAGAGCAACTCCAAAAAGAGGCTTGGATCAAGAGCTTCTTCCTCTGAGTATTGGAGGAATGAACCTCTCCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCCTCCCAAGTTGCATCCTTGTTCACTCAGCAAGGCAAGAAGGGCACCAACCAGGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGACAGGATACTATTTTCTGTGGGGTTTTTGATGGCCATGGTCCATTTGGTCACATGGTTGCAAAAAGAGTGAGAGATTCTCTTCCTCTAAAACTGAATTCCCATTGGGAACTTAATGCTGGTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAATGCTGCAGGAAGCATAAATCCAGAAGAGGCTGCCTCTGCATCTGCTGATGAGGATTCCCGCGTATCTGTTGATGCTGAAGAAACAGAAAAACACCCAGAAATCTTTCAGACACTTAAGGAATCCTTTTTGAAGGCATTCAAAGTTATGGATAGGGAACTAAAGATCCACCAAAGTATTGATTGTTTTTGTAGTGGAACAACTGCAGTAACTCTGATTAAGCAGGGTCATGATCTTATCGTTGGAAATGTTGGTGACTCTAGAGCTGTGTTGGGTACAAGAGAGAAAGATGATTCTCTTGTCGCTGTCCAGTTAACTGTGGATCTGAAACCCAATCTTCCAGCTGAAGAAGAGAGAATCCGCAAATGTAAAGGCCGTGTTTTTGCGCTTCAGGATGAACCTGAAGTTGCTCGTGTCTGGTTGCCAAACAATGATTCACCTGGTCTTGCCATGGCCAGGGCATTTGGTGATTTTTGTCTCAAAGATTTTGGCCTAATATCTGTTCCAGAGATGTCATACAGACGACTCACTGAGAAAGACGAATTCATTGTCTTGGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATAGTGGCAGCCACATCAAGGCGCTCCTCGGCTGCGCGAGCATTGGTGGAGTCAGCAGTTCGTGCATGGAGGTACAAGTATCCAACCTCCAAAGTGGATGACTGTGCTGTGGTTTGCCTCTTTCTGGACTCTGCCTCACACAAAGTATGCAGTGCTTCCAATGCCAAGTCCAAGGAGCAACCTAGTTCGGCCATCCAGGTCCACAATGGCGACAGGGAAGACGTTTTGGCCCCAACTGGTCTTGCAAGGTCAGGAACATGCAGGCAGAACAATGAAGATGATGACAACAACAAGAAGGAGGAAGAGGAAGAGTCTAAGGGAGAGGAAATAGATCCTGAGTCAGAAATAGAGTGGTCTGCTCTTGAAGGAGTGTCTCGTGTGAACACATTGCTAAACCTCCCAAGGTTTGAACCTGACAAAGAAGACAATGGGGTGAGAAAACAAAAATGA 1467 0.4663 MGSCFSAESRSPHPTSPSPSFRKRKSNSKKRLGSRASSSEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNSHWELNAGGEEVLKEISVNAAGSINPEEAASASADEDSRVSVDAEETEKHPEIFQTLKESFLKAFKVMDRELKIHQSIDCFCSGTTAVTLIKQGHDLIVGNVGDSRAVLGTREKDDSLVAVQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEMSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAATSRRSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSASHKVCSASNAKSKEQPSSAIQVHNGDREDVLAPTGLARSGTCRQNNEDDDNNKKEEEEESKGEEIDPESEIEWSALEGVSRVNTLLNLPRFEPDKEDNGVRKQK* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01462 488 MobiDBLite consensus disorder prediction 392 458 - -
Lapu1g01462 488 MobiDBLite consensus disorder prediction 1 22 - -
Lapu1g01462 488 Pfam Protein phosphatase 2C 159 360 IPR001932 -
Lapu1g01462 488 SMART PP2C_4 53 379 IPR001932 -
Lapu1g01462 488 MobiDBLite consensus disorder prediction 392 406 - -
Lapu1g01462 488 CDD PP2Cc 61 381 IPR001932 -
Lapu1g01462 488 ProSiteProfiles PPM-type phosphatase domain profile. 62 381 IPR001932 -
Lapu1g01462 488 PANTHER PROTEIN PHOSPHATASE 34 379 IPR015655 GO:0004722|GO:0006470
Lapu1g01462 488 SUPERFAMILY PP2C-like 55 382 IPR036457 -
Lapu1g01462 488 FunFam probable protein phosphatase 2C 33 57 384 - -
Lapu1g01462 488 Gene3D - 57 384 IPR036457 -
Lapu1g01462 488 MobiDBLite consensus disorder prediction 427 444 - -
Lapu1g01462 488 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01462 Lapu-Chr1 27441124 27445997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01462 1 479 PP2C-type Phosphatase Gene Family AT3G02750 62.879 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01462 - - gmx:100790373 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01462 1 27441124 27445997 Lapu1g01462 1 27441124 27445997 ECH