Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01461 ATGGTCATGGAAAATCAAAATTTGCCATCACTCTTCATCATCCTCTTGTTGGGTCATTGGATCCATGCTCAAGCTGCCCCTCCTCACTCTCTCGTCACACAACTCCCTGGCTTCAACTCCAATTTCCCATCCAACCACTATTCAGGATATATAAGTATTGATGGGAATTACGAGAGTGGGAAGAACCTGTTCTACTACTTCGTGAGTTCAGAAAGAAGTGCAGAGAAGGACCCAGTGGTGCTATGGCTTAATGGTGGACCTGGGTGTTCCAGCTTCGATGGCTTCGTTTATGAGCATGGACCATTCAACTTTGAGGCTGCAAAATCAAAAGGGAATCTACCCACTTTGCACATCAATCCTTACAGCTGGTCCAAGGTTTCCAACATTATATATTTGGATTCTCCCGCTGGTGTTGGTCTCTCTTATTCCAAGAACACAAGCAAGTATGTTACTGGGGACCTACAAACTGCGTCTGATACCCATGTTTTCCTCTTAAAGTGGTTTCAGCAATTTCCAGAATTTCAGGCCAATCCATTTTATATTGCTGGAGAGTCTTACGCTGGAGTTTATGTGCCTACTCTGGCTTCTGAAGTCGCTAAAGGAATACAGAGTGGTACAAAGCCCGTGATCAATTTTAAGGGTTACATGGTTGGAAATGGTGTCACGGACGAAATATTTGATGGCAATGCTCTCATCCCATTTGTGCATGGGATGGGCCTCATATCCGACAGTATCTATGAGGATTTGCAAGCTACATGCAAAGGAAACTACTACGATGCATACTCTTTGGACGAAAATGATGTGTGTTATAAGAGCATTGAAAAAGTTGATAGGGCCATTGATGGACTTAATGTGTACAATATATTAGAGCCATGCTACCATTTCCCTGATACTGCCACAGCCAAAGAAAATGGAAGCTTACCAATGAGTTTCAAGCAATTAGGAGTTACTGAGAAGCCTCTCCCAGTGAGGACGAGGATGTTTGGAAGAGCTTGGCCCTTTCGTGCACCAGTCAAAGCTGGTCTTGTCACATTATGGCCTCAATTGGCTCAAACCACTCATGTCGCTTGTGTTAATGATGAAGTAGCAAGCTCATGGCTAAACAATGATGCAGTGAGGAAAGCCATTCACGCCGAATCGGAAAGTGTAGCAGGTGCATGGGAATTATGTACAAGTAAGATAGAGTACCATCACAATGCTGGAAGCATGATTCCTTACCACAGGAACCTAACCAAGCTGGGCTACAAGGCACTTATTTTCAGTGGTGACCATGATATGTGTGTACCATTTACTGGAAGTGAGGCTTGGACTCGATCTCTGGGGTACAAGATTGTTGATGAATGGAGGCCATGGAACTCAAATAACCAAGTTGCTGGGTACTTGCAAGCTTACGAGAACAATCTCACATTCTTAACAATCAAGGGAGCTGGGCACACCGTGCCGGAATATAAGCCACGGGAAGCTTTGGATTTTTTCAGCCATTGGTTGGAAGGAAAGAAAATATAA 1506 0.4402 MVMENQNLPSLFIILLLGHWIHAQAAPPHSLVTQLPGFNSNFPSNHYSGYISIDGNYESGKNLFYYFVSSERSAEKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGNLPTLHINPYSWSKVSNIIYLDSPAGVGLSYSKNTSKYVTGDLQTASDTHVFLLKWFQQFPEFQANPFYIAGESYAGVYVPTLASEVAKGIQSGTKPVINFKGYMVGNGVTDEIFDGNALIPFVHGMGLISDSIYEDLQATCKGNYYDAYSLDENDVCYKSIEKVDRAIDGLNVYNILEPCYHFPDTATAKENGSLPMSFKQLGVTEKPLPVRTRMFGRAWPFRAPVKAGLVTLWPQLAQTTHVACVNDEVASSWLNNDAVRKAIHAESESVAGAWELCTSKIEYHHNAGSMIPYHRNLTKLGYKALIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRPWNSNNQVAGYLQAYENNLTFLTIKGAGHTVPEYKPREALDFFSHWLEGKKI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01461 501 Gene3D alpha/beta hydrolase 25 320 IPR029058 -
Lapu1g01461 501 Pfam Serine carboxypeptidase 36 498 IPR001563 GO:0004185|GO:0006508
Lapu1g01461 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Lapu1g01461 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 468 481 IPR001563 GO:0004185|GO:0006508
Lapu1g01461 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Lapu1g01461 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Lapu1g01461 501 Gene3D - 354 501 - -
Lapu1g01461 501 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Lapu1g01461 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 485 IPR001563 GO:0004185|GO:0006508
Lapu1g01461 501 ProSitePatterns Serine carboxypeptidases, histidine active site. 468 485 IPR033124 GO:0004185
Lapu1g01461 501 FunFam Carboxypeptidase 356 500 - -
Lapu1g01461 501 FunFam Carboxypeptidase 403 498 - -
Lapu1g01461 501 FunFam Carboxypeptidase 25 314 - -
Lapu1g01461 501 SUPERFAMILY alpha/beta-Hydrolases 32 499 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01461 Lapu-Chr1 27432216 27438072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01461 362 501 Calmodulin-binding Proteins AT2G22960 49.286 2.98e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01461 K16296 - gmx:100790895 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01461 1 27432216 27438072 Lapu1g01461 1 27432216 27438072 ECH
Lapu1g01461 1 27432216 27438072 Lapu10g00176 10 3594505 3596727 PCT