Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01428 ATGCAAAACTTCTCCTTCTTGTTCTTGTTTTTGTTTTTGTTTTTGGCATGTGCATTAGCATCTTCATCACCACAGCCCTTGTTCTTCTTCAACAGAAGGATCCTCCATGAACCCTTTATTCCTTTAACCTCTCTTCCTCCTTCCGAACCACCAAAACCACCACCTCCGCATCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCAACCCCAAAACAAAAACCCAAATACCCTTCATCATCCACCATTCCCACCACCGCCATTACCACAACACCAGCATCAGTAGCAACAACAACAACACAATCACCATTTTTCCCGTTATACCCCCCTTCCCCTCCTCCTCCTTCTCCGATCACCTTTGCCTCCTTTCCTGCCAACATCTCCTCCCTCATTCTCCCTCATTCCCCAAAACCCAATTCCTCCTCCAATAAACTCCTCCCCGCCGCTCTCTCCGCCGTCGTCGTCGCCGCATTCGCCGTCGCCATCTCCGCCTTTGTCTGTTACCGCCGCCGCCGGAACCCTCCTCCCTCCCCAGCTGGCAAAATTCTCCGTTCCGACACCGACCTCCGCCCGCTCCGCCGCAATGCCGAAACTTCCGTCGAAACACGCAAGCTCCGGCACACGTCCTCCACCAGCTCCGAGTTTCTCTACCTCGGCACCGTCGTGAACTCTCACATGATCGAGGACGCCTACGTCGGCGATGGTGAGCGGAAAATGGAATCGCCGGAGCTCCGGCCGCTTCCGCCGCTCGCTCGACAAGCTTCAGTGGCGCCTCCGCCCCGCGACGAGGCGGGTTTCACGACAGCGGAGGAGGACGAAGATGAGTTTTACTCGCCGAGAGGTTCGTCGTTGGGAGGCTCCGGCGGAACTGGATCGGTTTCCCGGCGAGTATTTGCAGCCGGTAGAAGCGTGACCTCTGGTTCGTGTTCTTCCTCTTCTTCCGGATCACCGGAAAGGTCTATCTCGAACTTGCCGCCGCCGGCGAGTTCGAGTTATCGGAAAACACTGCCGAAATCGCCGGAAAATTACAACCACCAGCACGTGCATTCTTCTGCTTCTTCTTCTTCTTCGATGTGCTCAACACCAGATAGGGTTTTCGCTGAGCGTGATAACGATGCATTAAGTGCACATGCTCATGCACATGCAGCACCATCATCATTGCATGAAGGAACAATGGAGAACAATGAAAATACATTATCTTCTTCGCCACCTCCGAGACTATCTAATGCCTCTTCGTCTTCCGCTTTTTCTCTTCCCTCCTCGCCGGAGAAGGTGACCCGTCATCACACTTTCGATCAGTCTCCGAGAATGTCGAGTGTCTCCGACGGACTAATGTTACCTGGCTTGTCATCGTTACCTTTGTCACCCGCCCTGCTTTCATCACCGGAAACCGAAAGAGGAACATTCAGTGAATTGGGAACAGGTTCTTTTGGTGCGCATAGAAAAAACTGGAGCATTCCACTACTGTCAATGCCAATAACAACACCCTTTGATGAAATTAGAACTGTTCCAGCTCCTCCACCTCTGCCACAGAGGAAGCACTGGGAGATTCCAGGCCCTGCTCCGCCACCACCGCCGCCATTGCCACGACAGAGGAAGCAGTGGGGAGTTCCAGCGCCGGGGCCGTCAACGCTGGTTGGTCAACCCGTGTCAAGGCCCCCGGAATTGGTGCCTCCTTCGAGGCCTTTTGTGTTGCAAAACCAAGCAACCAATGTTGAGTTGCCGGCAAGTTTGGGGGAAATGGAAGAGAGTGGTAAACCAAAATTGAAGCCCCTGCATTGGGACAAAGTGAGAACGAGTTCTGAACGTGAAATGGTGTGGGATCAGATGAAGTCCAGTTCGTTTAAATTGAATGAGAAAATGATTGAAACGTTGTTTGTAGTGAACAAACCAAACCCTAAGGCCAAGGATGCAACTACAAACTCTATTTCTCACCCGCCAAATCAGGAGGAAAGAGTACTCGATCCTAAAAAGTCGCAAAATATTTCAATCTTGCTGAAAGCGCTTAATGTCACTATTGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTACTGATACACTTGGAACAGAATTACTTGAAAGTTTATTAAGAATGGCACCAAGCAAGGAGGAAGAACGTAAGTTGAGGGAACATAAAGATGACTCACCAACCAAGCTTGGTCTGGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCCTTTAAAAGGATTGAAGCAATGCTTTACATAGCCAATTTTGAGTCTGAAGTGCAGTATCTTAGGACATCCTTTCAAACACTAGAGGCTGCATGTGAAGAGCTGCGACATTGTAGAATGTTCTTGAAGCTTTTGGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACCAACCGTGGGGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAGCTGGCTGATGTCAAAGGTGCAGATGGCAAAACCACTCTACTGCATTTTGTTGTACAAGAAATTATTCGGACCGAAGGTGCACGTCTCTTTGACACTACTCAAACTCCAAGCTCTACTCTGAGCGAAGATGCCAAGTGTAGGAGGCTTGGCCTACAAGTTGTATCAAGCCTGAGTTCAGAGCTAGCAAATGTGAAGAAGGCTGCTGCTATGGATTCCGAAGTTCTCAGCAGTGATGTGTCAAAACTTTCCAAAGGAATTGCAAACATAGCAGAGGTTGTGCAGTTAAGCCAAACCATGGGATCAGATGAAAGCAGTCAGAATTTTACAGAATCAATGAATAAATTCATCAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCCCAAGAAAGTGTTGCTTCCTCCCTTGTGAAGGAGATTACAGAGTATTTTCATGGGAACTTGGCAAAGGAAGAAGCTCATCCATTTAGACTCTTCATGGTTGTAAGAGACTTTCTAGCAGTTCTTGATCGTGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACCATGGTTAGTTCAGCCCATAAATTCCCTGTGCCAGTTAACCCAATGCTTCCACAACCCCTTCCTGGATTACATGAGAAGCAACAATATAGTAATAGCTCTTCAGATGATGAGACTCCCTCACCTTAG 3102 0.4868 MQNFSFLFLFLFLFLACALASSSPQPLFFFNRRILHEPFIPLTSLPPSEPPKPPPPHPSPSPSPSPSPSTPKQKPKYPSSSTIPTTAITTTPASVATTTTQSPFFPLYPPSPPPPSPITFASFPANISSLILPHSPKPNSSSNKLLPAALSAVVVAAFAVAISAFVCYRRRRNPPPSPAGKILRSDTDLRPLRRNAETSVETRKLRHTSSTSSEFLYLGTVVNSHMIEDAYVGDGERKMESPELRPLPPLARQASVAPPPRDEAGFTTAEEDEDEFYSPRGSSLGGSGGTGSVSRRVFAAGRSVTSGSCSSSSSGSPERSISNLPPPASSSYRKTLPKSPENYNHQHVHSSASSSSSMCSTPDRVFAERDNDALSAHAHAHAAPSSLHEGTMENNENTLSSSPPPRLSNASSSSAFSLPSSPEKVTRHHTFDQSPRMSSVSDGLMLPGLSSLPLSPALLSSPETERGTFSELGTGSFGAHRKNWSIPLLSMPITTPFDEIRTVPAPPPLPQRKHWEIPGPAPPPPPPLPRQRKQWGVPAPGPSTLVGQPVSRPPELVPPSRPFVLQNQATNVELPASLGEMEESGKPKLKPLHWDKVRTSSEREMVWDQMKSSSFKLNEKMIETLFVVNKPNPKAKDATTNSISHPPNQEERVLDPKKSQNISILLKALNVTIEEVCEALLEGSTDTLGTELLESLLRMAPSKEEERKLREHKDDSPTKLGLAEKFLKAVLDVPFAFKRIEAMLYIANFESEVQYLRTSFQTLEAACEELRHCRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLFDTTQTPSSTLSEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSDVSKLSKGIANIAEVVQLSQTMGSDESSQNFTESMNKFIRMAEEEIPKIQAQESVASSLVKEITEYFHGNLAKEEAHPFRLFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHEKQQYSNSSSDDETPSP* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01428 1033 ProSiteProfiles Formin homology-2 (FH2) domain profile. 579 1004 IPR015425 -
Lapu1g01428 1033 SMART it6_source 579 993 IPR015425 -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 186 205 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 299 362 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 1005 1033 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 632 651 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 456 477 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 376 444 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 74 95 - -
Lapu1g01428 1033 SUPERFAMILY Formin homology 2 domain (FH2 domain) 592 990 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 175 205 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 388 424 - -
Lapu1g01428 1033 PANTHER FORMIN-RELATED 111 1027 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 44 73 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 237 362 - -
Lapu1g01428 1033 Pfam Formin Homology 2 Domain 584 978 IPR015425 -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 502 533 - -
Lapu1g01428 1033 Gene3D Formin, FH2 domain 586 999 IPR042201 -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 634 648 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 456 471 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 502 541 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 1016 1033 - -
Lapu1g01428 1033 MobiDBLite consensus disorder prediction 44 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01428 Lapu-Chr1 27123764 27128209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01428 535 1020 FH2 protein (formin) Gene Family AT3G25500 70.281 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01428 - - vun:114185313 1538.47