Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01408 ATGGAAGGAGAGAGAGGTGGTGCTCCCAATTATGAGCTTCAAGTTTCATTCACCAACACCCCACAAGCCATACACGAATTGGGTTTTGTTCAGTATGAAGAAAACCAGGTCCTTGGCTTCTTGTCACCCTCTTCACAATCTCAATCTTCTCATCTCTCTCAATCCTTAAATAGTGATGTAGTTGTTACTACTACAGCTACAACTGCTGCAACCATCGGATTCATGAATCACAGTGAACTTGTCACCAAAACTTGGAATAACGACCAGGTAGGGAGTCTGGATCCAAAGGCTGTAGATGAAGAAAACTGCACTGGAAATGCTAGTGAAGGCAACAACAACGCTTGGTGGAGGAGCGCAGCTACAGAGAAGAACAAGGTGAAGATAAGAAGGAAACTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTATCGTTGCACCCACAACAACTGTAGGGTGAAGAAGAGGGTTGAACGACTCTCAGAGGATTGCCGTATGGTGATAACCACCTATGAAGGTAGACACAATCACTCTCCTTGCGAGGACTCAAATTCATCAGAGCATGAATGTTTTACCTCTTTCTAG 669 0.432 MEGERGGAPNYELQVSFTNTPQAIHELGFVQYEENQVLGFLSPSSQSQSSHLSQSLNSDVVVTTTATTAATIGFMNHSELVTKTWNNDQVGSLDPKAVDEENCTGNASEGNNNAWWRSAATEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCEDSNSSEHECFTSF* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01408 222 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01408 222 ProSiteProfiles WRKY domain profile. 143 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01408 222 FunFam WRKY transcription factor 57 134 208 - -
Lapu1g01408 222 SUPERFAMILY WRKY DNA-binding domain 140 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01408 222 Gene3D WRKY domain 134 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01408 222 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 212 IPR044810 GO:0003700
Lapu1g01408 222 Pfam WRKY DNA -binding domain 149 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01408 Lapu-Chr1 26945636 26953181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01408 3 222 WRKY Transcription Factor Family AT2G44745 57.269 2.52e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu1g01408 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01408 - - gmx:100170677 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01408 1 26945636 26953181 Lapu1g01408 1 26945636 26953181 ECH