Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01406 ATGAGGAGTCGCTTCGTTTTTTACCTTCATCTTCTTCTTTCATCTTTTCTGATTTTCACTTTGTTGCTGAATGCTGTCCATGCCAGTAAAAAGTGCTACATTGTGTACTTGGGAGCTCATTCTCATGGTCCAAACCCTTCATCTGTTGACCTTGAAACAGCCACACATTCTCATTATGATTTACTGGGTTCGATCTTGGGAAGTCATGAAAAGGCCAAAGAAGCAATTATTTATTCATATAACAAACACATCAATGGCTTCGCAGCTGCACTTCAAGAGGAAGAAGCCGCAGATATTGCAAAAAACCCAAACGTAGTATCTGTGTTTTTGAGCAAAGAGCATAAACTTCACACTACCCGTTCATGGGAGTTTCTTGGACTGCAAAGAAATGGTATCAACTCAGCATGGCAAAGAGGGAGATTTGGTGAGAATACAATCATCGGTAACATTGACACAGGTGTCTGGCCTGAGTCCAAGAGTTTTACTGACAATGGATTGGGTCCTGTCCCTGCAAAATGGCGTGGGGGCAATGTCTGTCAAATCCCGGGTTCAAACAAAGTTCCATGTAACAGGAAACTAATTGGAGCAAGATTCTTCAACAAAGCTTATGAAGCATTCAACGGTGAACTTCCCCGATCACAACAAACAGCACGTGACTTTGTGGGGCATGGCACGCATACTCTATCAACAGCAGGAGGGAATTTTGTGGCAGGTGCGAGTGTGTTTGGCAATGGCAATGGCACTGCAAAGGGTGGATCCCCAAGAGCTCGAGTTGCAGCCTACAAAGCTTGTTGGTCTCTCACTGATGTAGCTAGTTGTTTTGGTGCGGATGTGTTAGCTGCTATTGACCAAGCCATAAGTGATGGTGTTGATATTATCTCTGTCTCTGTTGGAGGCCGTGCTAGTCTCAGTGCTGAAGAGATATTCACAGATGAGGTTTCCATTGGGGCATTCCATGCACTTGGGAAAAATATTCTTGTGGTTGCGTCTGCAGGGAACGATGGACCAACACCTGGAACTGTTATCAATGTGGCTCCTTGGCTATTCACAATTGCAGCTAGCACACTAGATAGGGACTTCAGTAGTACCTTAACTTTTGGAAACAATCAGCAAATTACGGGAGCCAGTCTTTTTGTAAACATACCACCAAATCAGTCCTTTTCCCTAATCCTTGCTACTGATGCTAAATTTGCCAATGCGACAAATCGAGACGCTCAACTTTGTAAGGCTGGGACACTGGATCCTAGAAAAGTAAAGGGCAAAATAGTGTCATGCATTCGAGGTGGAAAAATAAAATCAGTCGCTGAGGGTAATGAAGCTCTATCTGCAGGAGCCAAGGGAATGATTTTGGGAAATCAAAAGCAAAATGGGAACACACTTCTTGCCGAGCCTCATGTTTTGTCCACTGTCAACTATCCTCAAAACCATAAAAAGACAACGCCTGGTTTTGACACAACTGCCACGGACGACACAATAAACTCGAATACGACAATAAGGATGTCTTCAGCAAGAACATTGCTAGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCAAGGGGACCCAATAAGATTCAGCCATCAATACTCAAGCCCGATGTAACTGCGCCTGGTGTGAACATACTGGCTTCCTATTCACTATTCGCTAGTGCTTCTAACTTGCCATCTGACACACGAAGAGGGTTTCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGCATAGCTGGACTCATCAAAACACTTCATCCTGATTGGAGTCCAGCTGCTATTAAATCAGCAATTATGACAACAGCAAGCACAAGAGATAACACCAACAGAACAATAAGGGATGCGTTTGATAAAAAATTGGCAGACCCTTTTGCTTATGGTTCAGGACATGTGCAACCAAACTCTGCAATAGATCCTGGACTTGTTTATGATCTAAGCCTTGACGATTACTTGAACTTCCTATGTGCTTCCGGATACGACCAACAACTCATTTCGGCACTTAATTTCAACAAAACATTCATTTGTTTAGGATTTCACAGCATAACAGACTTGAACTACCCTTCAATCACATTGCCAAATCTAGGGTTAAAAGCCGTAATTGTTACTCGCACCGTCACCAATGTTGGGCCACCAAGCACATATTTTGCAAAAGCCCAATTACCTGGATATACCATAGTTGTTGTACCCAATTCCTTGAGTTTCACGAAAATTGGTGAAAAGAAGACGTTCAAGGTTATTGTACAGGCTACAAGTGTAACTAAGAGGGGAAATTATAATTTTGGGGAATTGCTTTGGACAAATGAAAAACACATAGTCAGAAGTCCAATAACAGTTCGGCGCAAATGA 2355 0.4289 MRSRFVFYLHLLLSSFLIFTLLLNAVHASKKCYIVYLGAHSHGPNPSSVDLETATHSHYDLLGSILGSHEKAKEAIIYSYNKHINGFAAALQEEEAADIAKNPNVVSVFLSKEHKLHTTRSWEFLGLQRNGINSAWQRGRFGENTIIGNIDTGVWPESKSFTDNGLGPVPAKWRGGNVCQIPGSNKVPCNRKLIGARFFNKAYEAFNGELPRSQQTARDFVGHGTHTLSTAGGNFVAGASVFGNGNGTAKGGSPRARVAAYKACWSLTDVASCFGADVLAAIDQAISDGVDIISVSVGGRASLSAEEIFTDEVSIGAFHALGKNILVVASAGNDGPTPGTVINVAPWLFTIAASTLDRDFSSTLTFGNNQQITGASLFVNIPPNQSFSLILATDAKFANATNRDAQLCKAGTLDPRKVKGKIVSCIRGGKIKSVAEGNEALSAGAKGMILGNQKQNGNTLLAEPHVLSTVNYPQNHKKTTPGFDTTATDDTINSNTTIRMSSARTLLGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILASYSLFASASNLPSDTRRGFPFNVMQGTSMSCPHVAGIAGLIKTLHPDWSPAAIKSAIMTTASTRDNTNRTIRDAFDKKLADPFAYGSGHVQPNSAIDPGLVYDLSLDDYLNFLCASGYDQQLISALNFNKTFICLGFHSITDLNYPSITLPNLGLKAVIVTRTVTNVGPPSTYFAKAQLPGYTIVVVPNSLSFTKIGEKKTFKVIVQATSVTKRGNYNFGELLWTNEKHIVRSPITVRRK* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01406 784 Gene3D - 357 507 - -
Lapu1g01406 784 CDD Peptidases_S8_3 114 606 IPR034197 -
Lapu1g01406 784 Pfam Subtilase family 142 611 IPR000209 GO:0006508|GO:0008236
Lapu1g01406 784 CDD PA_subtilisin_like 363 470 - -
Lapu1g01406 784 FunFam Subtilisin-like protease SBT1.5 144 368 - -
Lapu1g01406 784 Gene3D - 657 783 - -
Lapu1g01406 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Lapu1g01406 784 ProSiteProfiles Serine proteases, subtilase domain profile. 121 640 - -
Lapu1g01406 784 Pfam Peptidase inhibitor I9 33 117 IPR010259 -
Lapu1g01406 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 781 IPR045051 -
Lapu1g01406 784 Pfam Fibronectin type-III domain 686 781 IPR041469 -
Lapu1g01406 784 SUPERFAMILY Subtilisin-like 116 644 IPR036852 GO:0004252|GO:0006508
Lapu1g01406 784 FunFam Subtilisin-like protease SBT5.3 22 117 - -
Lapu1g01406 784 Gene3D Peptidase S8/S53 domain 145 653 IPR036852 GO:0004252|GO:0006508
Lapu1g01406 784 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Lapu1g01406 784 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lapu1g01406 784 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lapu1g01406 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 117 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01406 Lapu-Chr1 26915171 26920952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01406 20 782 Subtilisin-like Serine Gene Family AT5G59810 52.926 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01406 - - gmx:100803751 1390.56