Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01405 ATGGAATGCACGTTTGAAAGGGAAAAGTCCATGCTGGTTCTATTTCTTTGTGTCTTTCTAACACTCTCGGGGCCCCAAGCTGCAGCTGAAGACAGTGAAGCAAATGCTTTGTTGAAGTGGAAACACAGCTTTGACAACCACAGCCAAGCTCTATTGTCAACATGGAGAGGCAATAATCCATGCACATGGGAAGGAATTCAGTGTGACAAATCCAAGTCTGTATCCACCATAAATCTTGCAACTTATGGACTTAAAGGTACACTTCACACTCTCAGCTTCTCCATTTTTCCTAACCTCCTCAGCCTGAATATCTATGAAAACTCCTTTCATGGCACCATTCCCCCACAGATTGGTAACATAACCAAAGTAAATGTTTTAAATTTTTCTTCAAATTCTTTCCACGGTTCCATCCCTCAAGAAATGTGGACACTAGGGAGTTTACATAGCCTTGATCTTTCCCTCTGTCACCTAAGTGGAGAGATTCCTAATTCCATAGCAAACTTGTCCAACCTGTCATTTCTAGATTTAGGTGGCAACAATTTTTCTAGCCGCATTCCTCCAGGGATTGGAAAGTTGCACAAGCTGGAGTATCTAGGTATCGCAGGTAGTAACCTTTTTGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTGAACTTATTGATTTGTCAAGAAACTCTCTTTCTGGTACAATCCCCGAAACAATAGGTAACATGAGCAATTTAAATCAACTTTACCTTTCTAATAACTCCCTAATATCTGGGCCAATCCCATCCTCCGTTTGGAACATGTCTAACTTGACCTTGCTCTTTCTTGAAGCCAATAATCTTTCTGGATCAATCCCTGCATCCATAGAAAATCTGGCCAATTTAGAGCAACTTGGACTTGATATCAATCAATTTTCCGGACCCATTCCTTCCACCATTGGAAACTTGACAAAGCTCACCATGTTGTATTTAGGCTTTAATAATCTTTCTGGATCAATTCCTCCCTCTATAGGTAATTTGCTCAATTTGGATGCCCTTAGTCTCCAAGCAAACAATCTCTCTGGACCAATTCCTGACACAATTGGAAATTTGAAAATGCTCACCGTTTTGGAATTGTCCACTAACAAACTTAATGGCAGCATTCCACATGGCTTGAATGACATTACCAACTGGTATTCCTTGTTACTAGCTGAGAATGATTTCACTGGCCATTTACCTCCTCAAATTTGCTCTGCCGGGTCACTAGTGTTCTTTAATGCTTTTGGCAACCGTTTCACGGGTCCAGTTCCAAGAAGCTTAAGGAATTGCTCTAGTATTGCCAGACTCAGGTTGGAACGAAACCAATTGGAAGGAGATATAGCACAAGATTTTGGTGTATATTCAAATTTGAAGTACATTGATTTGAGTGACAATAAATTTCATGGTCACATTTCACCAAACTGGGGAAAGTGCCAGAGTCTTGAAACCTTCAAGATATCCAACAATAATATTTCCGGTGGTATACCAATAGAACTTGTTGAGGCAACCAAGCTAGGTGTGCTTCACCTTTCTTCTAATCACTTAAGTGGAAAGCTTCCAAAGGAATTAGGAAATATGAAATCGTTATTTCAGCTCAAGATTAGCAATAACCAACTTTCTGGAAACATTCCAAGAGAAATTGGATTACTGAAAAATCTTGAAGACTTGGATCTGGGAGATAACGAGTTGAGCGGCACAATACCAATAGAAGTTGTGAAATTGCTCAAGTTACGGAATTTGAATTTGAGCAAAAACAAAATTGATGGAAGCATTCCCTCTCAGCTTAGCCAATCTTTAGTATCTCTTGATCTTAGTGCCAATTTGTTGATTGGAACAATACCAACAAATCTTGGACAGTTGCAAAGCTTATTCATGTTGAATCTCTCTCATAATAGTCTTTCTGGTACCATTCCTTCCACTTTTAACAGAATATTGAGTATCGTCAACATATCAGACAACCAATTAGAAGGGCCAATTCCAAATACTCCAGCTTTTCTTGATGCTCCAATTGAATCATTGAAAAATAATAAAGGCTTATGTGGTAATGTCACGGGATTGGTTCTTTGTCCAACCGACCATAATCGAAAGAACAACAAAGTCATCCTAGTGGCATTCCTTAGTTTAGGAGCTCTAGTAGTGGTATTGTGTGGGGTGGCACTTGCAATTTATACTTTTTGTCGGGGTAAAAGAAAGGGAAAAGGTCATTCTAATTCTGAAGAAGCGCCAAGGGAAGTACTCTTTTCCATATGGAGCTACGATGGGAAAATCATGTTTGAAAATATCATTGAAGCTTCAGAGAATTTTGATGTCAAATATCTCATTGGAGCAGGAAGTCAAGGGTATGTTTACAAGGTGGTGTTGCCTTCAGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCGGTGATAGATGAGGAAATGTCAGATTTTAGTTCAAAGGCTTTTGCAAGTGAGATTAAAGCATTGACTGAAATAAAACATCGGAACATTATAAAGTTGCATGGATTTTGCTCACATTCACAGGTCTCATTTTTGGTATATCAGTTCATGGAAGGGGGTAGCTTGGATCAATTGCTGAACAAAGATACACAAGCAACTGCGTTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTATCTTATTTGCACCATGATTGCTCACCTCCTATTGTTCATCGGGACATATCAAGTAAAAATGTTCTTTTGGATCTTGAGTATGAAGCTCATGTCTCTGACTTTGGGACTGCTAAGTTTTTGAAGCCTAGTTCTGATAGTTGGACTCAATTCGCAGGCACCTTTGGATATGCTGCTCCAGAGTTGGCCCAGACAATGGAAGTGAATGAGAAATGTGATGTGTATAGCTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAACATCCAAGAGATCTCATTTCTCAATTTGTGTCACCATCTATGGCACCAATTGTTAACGATTTGCTATTGGCTGATGTTTTAGATCAACGGCCTCCTCAACCTACAAAACCAATTGATGGGGAGGTCATATTAATCGTAAGGTTAGCACTTGCTTGCTTGAGCCAAAATCCACGTTCCCGCCCAACCATGGATCAAGTATCCAAGGCGTTTGGAACAGGAAAATCACCTTTGGCTGCCCTATTTCCTATGATCAGACTTGGACAACTCCGCTGA 3192 0.3982 MECTFEREKSMLVLFLCVFLTLSGPQAAAEDSEANALLKWKHSFDNHSQALLSTWRGNNPCTWEGIQCDKSKSVSTINLATYGLKGTLHTLSFSIFPNLLSLNIYENSFHGTIPPQIGNITKVNVLNFSSNSFHGSIPQEMWTLGSLHSLDLSLCHLSGEIPNSIANLSNLSFLDLGGNNFSSRIPPGIGKLHKLEYLGIAGSNLFGSIPQEIGMLTNLELIDLSRNSLSGTIPETIGNMSNLNQLYLSNNSLISGPIPSSVWNMSNLTLLFLEANNLSGSIPASIENLANLEQLGLDINQFSGPIPSTIGNLTKLTMLYLGFNNLSGSIPPSIGNLLNLDALSLQANNLSGPIPDTIGNLKMLTVLELSTNKLNGSIPHGLNDITNWYSLLLAENDFTGHLPPQICSAGSLVFFNAFGNRFTGPVPRSLRNCSSIARLRLERNQLEGDIAQDFGVYSNLKYIDLSDNKFHGHISPNWGKCQSLETFKISNNNISGGIPIELVEATKLGVLHLSSNHLSGKLPKELGNMKSLFQLKISNNQLSGNIPREIGLLKNLEDLDLGDNELSGTIPIEVVKLLKLRNLNLSKNKIDGSIPSQLSQSLVSLDLSANLLIGTIPTNLGQLQSLFMLNLSHNSLSGTIPSTFNRILSIVNISDNQLEGPIPNTPAFLDAPIESLKNNKGLCGNVTGLVLCPTDHNRKNNKVILVAFLSLGALVVVLCGVALAIYTFCRGKRKGKGHSNSEEAPREVLFSIWSYDGKIMFENIIEASENFDVKYLIGAGSQGYVYKVVLPSGLVVAVKKLHSVIDEEMSDFSSKAFASEIKALTEIKHRNIIKLHGFCSHSQVSFLVYQFMEGGSLDQLLNKDTQATAFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPSSDSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPRDLISQFVSPSMAPIVNDLLLADVLDQRPPQPTKPIDGEVILIVRLALACLSQNPRSRPTMDQVSKAFGTGKSPLAALFPMIRLGQLR* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01405 1063 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Lapu1g01405 1063 Gene3D Ribonuclease Inhibitor 186 280 IPR032675 -
Lapu1g01405 1063 FunFam MDIS1-interacting receptor like kinase 2 isoform A 30 185 - -
Lapu1g01405 1063 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Lapu1g01405 1063 ProSiteProfiles Protein kinase domain profile. 771 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01405 1063 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Lapu1g01405 1063 Gene3D Phosphorylase Kinase; domain 1 735 851 - -
Lapu1g01405 1063 Gene3D Ribonuclease Inhibitor 281 384 IPR032675 -
Lapu1g01405 1063 SUPERFAMILY Protein kinase-like (PK-like) 754 1041 IPR011009 -
Lapu1g01405 1063 FunFam MDIS1-interacting receptor like kinase 2 852 1049 - -
Lapu1g01405 1063 ProSiteProfiles Leucine-rich repeat profile. 579 601 IPR001611 GO:0005515
Lapu1g01405 1063 FunFam Leucine-rich repeat receptor protein kinase MSP1 733 851 - -
Lapu1g01405 1063 FunFam Leucine-rich receptor-like protein kinase family protein 284 380 - -
Lapu1g01405 1063 SUPERFAMILY RNI-like 77 374 - -
Lapu1g01405 1063 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 385 696 - -
Lapu1g01405 1063 SUPERFAMILY RNI-like 342 660 - -
Lapu1g01405 1063 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 316 1043 - -
Lapu1g01405 1063 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
Lapu1g01405 1063 SMART LRR_sd22_2 361 384 - -
Lapu1g01405 1063 SMART LRR_sd22_2 577 600 - -
Lapu1g01405 1063 SMART LRR_sd22_2 553 574 - -
Lapu1g01405 1063 SMART LRR_sd22_2 313 339 - -
Lapu1g01405 1063 SMART LRR_sd22_2 265 291 - -
Lapu1g01405 1063 SMART LRR_sd22_2 216 242 - -
Lapu1g01405 1063 Pfam Protein kinase domain 773 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01405 1063 SMART LRR_typ_2 168 192 IPR003591 -
Lapu1g01405 1063 SMART LRR_typ_2 313 337 IPR003591 -
Lapu1g01405 1063 SMART LRR_typ_2 623 646 IPR003591 -
Lapu1g01405 1063 SMART LRR_typ_2 361 385 IPR003591 -
Lapu1g01405 1063 SMART LRR_typ_2 577 601 IPR003591 -
Lapu1g01405 1063 SMART LRR_typ_2 265 289 IPR003591 -
Lapu1g01405 1063 SMART LRR_typ_2 529 553 IPR003591 -
Lapu1g01405 1063 SMART LRR_typ_2 216 240 IPR003591 -
Lapu1g01405 1063 ProSitePatterns Tyrosine protein kinases specific active-site signature. 897 909 IPR008266 GO:0004672|GO:0006468
Lapu1g01405 1063 Gene3D Transferase(Phosphotransferase) domain 1 852 1048 - -
Lapu1g01405 1063 FunFam MDIS1-interacting receptor like kinase 2 isoform A 186 283 - -
Lapu1g01405 1063 Gene3D Ribonuclease Inhibitor 385 692 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01405 Lapu-Chr1 26908920 26912415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01405 1 945 Receptor kinase-like Gene Family AT4G08850 43.971 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu1g01405 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01405 - - gmx:100812486 1433.7