Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu1g01405 | ATGGAATGCACGTTTGAAAGGGAAAAGTCCATGCTGGTTCTATTTCTTTGTGTCTTTCTAACACTCTCGGGGCCCCAAGCTGCAGCTGAAGACAGTGAAGCAAATGCTTTGTTGAAGTGGAAACACAGCTTTGACAACCACAGCCAAGCTCTATTGTCAACATGGAGAGGCAATAATCCATGCACATGGGAAGGAATTCAGTGTGACAAATCCAAGTCTGTATCCACCATAAATCTTGCAACTTATGGACTTAAAGGTACACTTCACACTCTCAGCTTCTCCATTTTTCCTAACCTCCTCAGCCTGAATATCTATGAAAACTCCTTTCATGGCACCATTCCCCCACAGATTGGTAACATAACCAAAGTAAATGTTTTAAATTTTTCTTCAAATTCTTTCCACGGTTCCATCCCTCAAGAAATGTGGACACTAGGGAGTTTACATAGCCTTGATCTTTCCCTCTGTCACCTAAGTGGAGAGATTCCTAATTCCATAGCAAACTTGTCCAACCTGTCATTTCTAGATTTAGGTGGCAACAATTTTTCTAGCCGCATTCCTCCAGGGATTGGAAAGTTGCACAAGCTGGAGTATCTAGGTATCGCAGGTAGTAACCTTTTTGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTGAACTTATTGATTTGTCAAGAAACTCTCTTTCTGGTACAATCCCCGAAACAATAGGTAACATGAGCAATTTAAATCAACTTTACCTTTCTAATAACTCCCTAATATCTGGGCCAATCCCATCCTCCGTTTGGAACATGTCTAACTTGACCTTGCTCTTTCTTGAAGCCAATAATCTTTCTGGATCAATCCCTGCATCCATAGAAAATCTGGCCAATTTAGAGCAACTTGGACTTGATATCAATCAATTTTCCGGACCCATTCCTTCCACCATTGGAAACTTGACAAAGCTCACCATGTTGTATTTAGGCTTTAATAATCTTTCTGGATCAATTCCTCCCTCTATAGGTAATTTGCTCAATTTGGATGCCCTTAGTCTCCAAGCAAACAATCTCTCTGGACCAATTCCTGACACAATTGGAAATTTGAAAATGCTCACCGTTTTGGAATTGTCCACTAACAAACTTAATGGCAGCATTCCACATGGCTTGAATGACATTACCAACTGGTATTCCTTGTTACTAGCTGAGAATGATTTCACTGGCCATTTACCTCCTCAAATTTGCTCTGCCGGGTCACTAGTGTTCTTTAATGCTTTTGGCAACCGTTTCACGGGTCCAGTTCCAAGAAGCTTAAGGAATTGCTCTAGTATTGCCAGACTCAGGTTGGAACGAAACCAATTGGAAGGAGATATAGCACAAGATTTTGGTGTATATTCAAATTTGAAGTACATTGATTTGAGTGACAATAAATTTCATGGTCACATTTCACCAAACTGGGGAAAGTGCCAGAGTCTTGAAACCTTCAAGATATCCAACAATAATATTTCCGGTGGTATACCAATAGAACTTGTTGAGGCAACCAAGCTAGGTGTGCTTCACCTTTCTTCTAATCACTTAAGTGGAAAGCTTCCAAAGGAATTAGGAAATATGAAATCGTTATTTCAGCTCAAGATTAGCAATAACCAACTTTCTGGAAACATTCCAAGAGAAATTGGATTACTGAAAAATCTTGAAGACTTGGATCTGGGAGATAACGAGTTGAGCGGCACAATACCAATAGAAGTTGTGAAATTGCTCAAGTTACGGAATTTGAATTTGAGCAAAAACAAAATTGATGGAAGCATTCCCTCTCAGCTTAGCCAATCTTTAGTATCTCTTGATCTTAGTGCCAATTTGTTGATTGGAACAATACCAACAAATCTTGGACAGTTGCAAAGCTTATTCATGTTGAATCTCTCTCATAATAGTCTTTCTGGTACCATTCCTTCCACTTTTAACAGAATATTGAGTATCGTCAACATATCAGACAACCAATTAGAAGGGCCAATTCCAAATACTCCAGCTTTTCTTGATGCTCCAATTGAATCATTGAAAAATAATAAAGGCTTATGTGGTAATGTCACGGGATTGGTTCTTTGTCCAACCGACCATAATCGAAAGAACAACAAAGTCATCCTAGTGGCATTCCTTAGTTTAGGAGCTCTAGTAGTGGTATTGTGTGGGGTGGCACTTGCAATTTATACTTTTTGTCGGGGTAAAAGAAAGGGAAAAGGTCATTCTAATTCTGAAGAAGCGCCAAGGGAAGTACTCTTTTCCATATGGAGCTACGATGGGAAAATCATGTTTGAAAATATCATTGAAGCTTCAGAGAATTTTGATGTCAAATATCTCATTGGAGCAGGAAGTCAAGGGTATGTTTACAAGGTGGTGTTGCCTTCAGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCGGTGATAGATGAGGAAATGTCAGATTTTAGTTCAAAGGCTTTTGCAAGTGAGATTAAAGCATTGACTGAAATAAAACATCGGAACATTATAAAGTTGCATGGATTTTGCTCACATTCACAGGTCTCATTTTTGGTATATCAGTTCATGGAAGGGGGTAGCTTGGATCAATTGCTGAACAAAGATACACAAGCAACTGCGTTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTATCTTATTTGCACCATGATTGCTCACCTCCTATTGTTCATCGGGACATATCAAGTAAAAATGTTCTTTTGGATCTTGAGTATGAAGCTCATGTCTCTGACTTTGGGACTGCTAAGTTTTTGAAGCCTAGTTCTGATAGTTGGACTCAATTCGCAGGCACCTTTGGATATGCTGCTCCAGAGTTGGCCCAGACAATGGAAGTGAATGAGAAATGTGATGTGTATAGCTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAACATCCAAGAGATCTCATTTCTCAATTTGTGTCACCATCTATGGCACCAATTGTTAACGATTTGCTATTGGCTGATGTTTTAGATCAACGGCCTCCTCAACCTACAAAACCAATTGATGGGGAGGTCATATTAATCGTAAGGTTAGCACTTGCTTGCTTGAGCCAAAATCCACGTTCCCGCCCAACCATGGATCAAGTATCCAAGGCGTTTGGAACAGGAAAATCACCTTTGGCTGCCCTATTTCCTATGATCAGACTTGGACAACTCCGCTGA | 3192 | 0.3982 | MECTFEREKSMLVLFLCVFLTLSGPQAAAEDSEANALLKWKHSFDNHSQALLSTWRGNNPCTWEGIQCDKSKSVSTINLATYGLKGTLHTLSFSIFPNLLSLNIYENSFHGTIPPQIGNITKVNVLNFSSNSFHGSIPQEMWTLGSLHSLDLSLCHLSGEIPNSIANLSNLSFLDLGGNNFSSRIPPGIGKLHKLEYLGIAGSNLFGSIPQEIGMLTNLELIDLSRNSLSGTIPETIGNMSNLNQLYLSNNSLISGPIPSSVWNMSNLTLLFLEANNLSGSIPASIENLANLEQLGLDINQFSGPIPSTIGNLTKLTMLYLGFNNLSGSIPPSIGNLLNLDALSLQANNLSGPIPDTIGNLKMLTVLELSTNKLNGSIPHGLNDITNWYSLLLAENDFTGHLPPQICSAGSLVFFNAFGNRFTGPVPRSLRNCSSIARLRLERNQLEGDIAQDFGVYSNLKYIDLSDNKFHGHISPNWGKCQSLETFKISNNNISGGIPIELVEATKLGVLHLSSNHLSGKLPKELGNMKSLFQLKISNNQLSGNIPREIGLLKNLEDLDLGDNELSGTIPIEVVKLLKLRNLNLSKNKIDGSIPSQLSQSLVSLDLSANLLIGTIPTNLGQLQSLFMLNLSHNSLSGTIPSTFNRILSIVNISDNQLEGPIPNTPAFLDAPIESLKNNKGLCGNVTGLVLCPTDHNRKNNKVILVAFLSLGALVVVLCGVALAIYTFCRGKRKGKGHSNSEEAPREVLFSIWSYDGKIMFENIIEASENFDVKYLIGAGSQGYVYKVVLPSGLVVAVKKLHSVIDEEMSDFSSKAFASEIKALTEIKHRNIIKLHGFCSHSQVSFLVYQFMEGGSLDQLLNKDTQATAFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPSSDSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPRDLISQFVSPSMAPIVNDLLLADVLDQRPPQPTKPIDGEVILIVRLALACLSQNPRSRPTMDQVSKAFGTGKSPLAALFPMIRLGQLR* | 1064 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu1g01405 | 1063 | Gene3D | Ribonuclease Inhibitor | 29 | 185 | IPR032675 | - | |
Lapu1g01405 | 1063 | Gene3D | Ribonuclease Inhibitor | 186 | 280 | IPR032675 | - | |
Lapu1g01405 | 1063 | FunFam | MDIS1-interacting receptor like kinase 2 isoform A | 30 | 185 | - | - | |
Lapu1g01405 | 1063 | Pfam | Leucine rich repeat | 194 | 253 | IPR001611 | GO:0005515 | |
Lapu1g01405 | 1063 | ProSiteProfiles | Protein kinase domain profile. | 771 | 1051 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu1g01405 | 1063 | Pfam | Leucine rich repeat N-terminal domain | 31 | 69 | IPR013210 | - | |
Lapu1g01405 | 1063 | Gene3D | Phosphorylase Kinase; domain 1 | 735 | 851 | - | - | |
Lapu1g01405 | 1063 | Gene3D | Ribonuclease Inhibitor | 281 | 384 | IPR032675 | - | |
Lapu1g01405 | 1063 | SUPERFAMILY | Protein kinase-like (PK-like) | 754 | 1041 | IPR011009 | - | |
Lapu1g01405 | 1063 | FunFam | MDIS1-interacting receptor like kinase 2 | 852 | 1049 | - | - | |
Lapu1g01405 | 1063 | ProSiteProfiles | Leucine-rich repeat profile. | 579 | 601 | IPR001611 | GO:0005515 | |
Lapu1g01405 | 1063 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 733 | 851 | - | - | |
Lapu1g01405 | 1063 | FunFam | Leucine-rich receptor-like protein kinase family protein | 284 | 380 | - | - | |
Lapu1g01405 | 1063 | SUPERFAMILY | RNI-like | 77 | 374 | - | - | |
Lapu1g01405 | 1063 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 385 | 696 | - | - | |
Lapu1g01405 | 1063 | SUPERFAMILY | RNI-like | 342 | 660 | - | - | |
Lapu1g01405 | 1063 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 316 | 1043 | - | - | |
Lapu1g01405 | 1063 | Pfam | Leucine Rich Repeat | 146 | 168 | IPR001611 | GO:0005515 | |
Lapu1g01405 | 1063 | SMART | LRR_sd22_2 | 361 | 384 | - | - | |
Lapu1g01405 | 1063 | SMART | LRR_sd22_2 | 577 | 600 | - | - | |
Lapu1g01405 | 1063 | SMART | LRR_sd22_2 | 553 | 574 | - | - | |
Lapu1g01405 | 1063 | SMART | LRR_sd22_2 | 313 | 339 | - | - | |
Lapu1g01405 | 1063 | SMART | LRR_sd22_2 | 265 | 291 | - | - | |
Lapu1g01405 | 1063 | SMART | LRR_sd22_2 | 216 | 242 | - | - | |
Lapu1g01405 | 1063 | Pfam | Protein kinase domain | 773 | 1040 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 168 | 192 | IPR003591 | - | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 313 | 337 | IPR003591 | - | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 623 | 646 | IPR003591 | - | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 361 | 385 | IPR003591 | - | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 577 | 601 | IPR003591 | - | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 265 | 289 | IPR003591 | - | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 529 | 553 | IPR003591 | - | |
Lapu1g01405 | 1063 | SMART | LRR_typ_2 | 216 | 240 | IPR003591 | - | |
Lapu1g01405 | 1063 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 897 | 909 | IPR008266 | GO:0004672|GO:0006468 | |
Lapu1g01405 | 1063 | Gene3D | Transferase(Phosphotransferase) domain 1 | 852 | 1048 | - | - | |
Lapu1g01405 | 1063 | FunFam | MDIS1-interacting receptor like kinase 2 isoform A | 186 | 283 | - | - | |
Lapu1g01405 | 1063 | Gene3D | Ribonuclease Inhibitor | 385 | 692 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu1g01405 | Lapu-Chr1 | 26908920 | 26912415 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu1g01405 | 1 | 945 | Receptor kinase-like Gene Family | AT4G08850 | 43.971 | 0.0 | 725 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Lapu1g01405 | Pkinase | 3e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu1g01405 | - | - | gmx:100812486 | 1433.7 |