Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01401 ATGTCAAATTTGATTTCCGTCAACATATCATACAATCGGTTAGAAGGGCCACTTCCAAAAAATCAAGCCTTTCAAACGTCTCCAGTTGAATCATTGAAAAATAACAAAGGTTTGTGTGGGAACGTTACTGGGTTGATGCTTTGCCCAACCAACCGCAAACAAAAGAGGCACAAGGGCATTCTTCTGGTGTCGGAGGGCAAGGAAATGTTTACAGGGCTGAGTTTCTTCAGCAAGAATGTTCATTTGGATTCACAATATGAAGCTCGTGTCACTGATTTTGGGACAGCTAAGATTCTAAAGCCTGGTTGCACTTGGACGACGTTTGGAGGCACCTTTGGGTATGCAGCTCCAGAGCTGGCCCAAACTATGGAAGTGACTGAGAAATGTGATGTATTCAGTTTTGGAGTGCTTTGTCTAGAAATCATCATGGGGAAGCATCCGGGGGATACCATTTCTTCATTGCTATCTTCATCTTCAGCAGCAATAACTCATAATTTGCTATTGATTGACATCTTAGACCAACGATCTCCTTATCCTCTTAAATCAGTTGTGAGGGATGTCATTTTGGTCTCAAGCTTGGCATTTTCTTGCTTAAGGGAAAACCCATTTGGATCAAGTGTTCAAAAAGTTTGTGATGGGGAAATCACATTTAGCAGACCAGTTCCTTATGATTAA 675 0.4163 MSNLISVNISYNRLEGPLPKNQAFQTSPVESLKNNKGLCGNVTGLMLCPTNRKQKRHKGILLVSEGKEMFTGLSFFSKNVHLDSQYEARVTDFGTAKILKPGCTWTTFGGTFGYAAPELAQTMEVTEKCDVFSFGVLCLEIIMGKHPGDTISSLLSSSSAAITHNLLLIDILDQRSPYPLKSVVRDVILVSSLAFSCLRENPFGSSVQKVCDGEITFSRPVPYD* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01401 224 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01401 224 Pfam Protein kinase domain 78 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01401 224 Gene3D Transferase(Phosphotransferase) domain 1 74 204 - -
Lapu1g01401 224 PANTHER LEUCINE RICH REPEAT KINASE 2 1 59 - -
Lapu1g01401 224 Gene3D Ribonuclease Inhibitor 1 57 IPR032675 -
Lapu1g01401 224 SUPERFAMILY Protein kinase-like (PK-like) 77 202 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01401 Lapu-Chr1 26881721 26883227 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01401 77 200 Receptor kinase-like Gene Family AT1G75820 39.416 7.55e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu1g01401 Pkinase 3.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01401 - - vra:106759489 201.445