Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01394 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTACCTGTTCTGGTTGAGGTATCTAATGCACACACTGCTGCAATGAGAGAAGGTGGACAGAGACTAAATGGGCAGGATGTTTCGGGTGTGCGAGGGATTCCAGCAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGGCCCTATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCGCGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGATCCAGTCAAGAGCCTCCCTCCCCTGTTCCTACAAGAACGTGGAAAGGAAAGGGCTCTTTACCAGAACCTGTAGAACTTGTGCCTGATATTCAGACATTGAAGGGTAGCAATGTTTCTTTTGGGGAAACTGAACCAAGTTCATTTGCTGGTGCAAGTCATCCACCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTACCAATAGGTCAAACCAAATCTGAGGCAGCATGCTTAATGAAGAGTGTGTCCTCTAAGGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACCGAACCTGGCTGTTGTTTCTCCAGCAGAAAGCATGGTTGATCAGTCAAATGAGATGGGTAACTTACCCTCTCCACTTTTAGGTGCTCGTGCATCTCGGAATACTGAGAACTCTCCTCCTGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTGAGTCCTCTTAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATCGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTCACTAGTGATGGCTTGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTGGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGGCTCAGTGATGACAGCAACTGGAGTAACATAACTGGTAGTGCCAATAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCTATCCTTGCCATCCGAACACGGGATGGAATTCTTGGCATGAGTCACTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGATGCTTTTTTGCGATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGTTGGATCATCCATTTCTGCCTACGTTATATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTTCACACCTTAAGGCAACGACAACCTGGGAAACATTTCTCGGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTGGTGTACCGAGACCTTAAGCCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTTTCAGACTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATCAGAAATATTGATGGCGATCCCTCCAAACGAGCTGGTGGTGCATTCTGCGTTCAGCCGGCTTGTATTGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCTCGCCTCTTTGCTCAGAAGAATAAGAAGTCACGGAGGCCTAAAGCCGATCCTGGCCTGCCATCCAGCACGCTTCCTGAGCTTGTTGCAGAACCAACAACGGCCCGGTCGATGTCTTTTGTCGGTACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACCTTTGGAATTTTCTTGCACGAGCTATTATATGGTAAGACTCCTTTCAAAGGCTCAGGAAACCGAGCGACCCTGTTCAATGTAGTAGGCCAGCAGCTCAGATTCCCTGAGTCACCGGCCACCAGTTATGCCAGCCGTGATCTCATCCGGGGCCTGCTGGTAAAGGAGCCGCAGCACCGGCTCGGAGTGAAGAGGGGTGCAACTGAGATCAAACAGCATCCCTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACGCCTCCAGAAGTTCCAAGAGCAGTTGAATGTGATGTAGCAGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCATCAACAATAGTAGTAAGAGAATGGCTGGTAATAATGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2286 0.4663 MERVAEPKVLPRSLPVLVEVSNAHTAAMREGGQRLNGQDVSGVRGIPAREGNQFSKSRDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSSQEPPSPVPTRTWKGKGSLPEPVELVPDIQTLKGSNVSFGETEPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAACLMKSVSSKGPFLEDLSICVPAKKPNLAVVSPAESMVDQSNEMGNLPSPLLGARASRNTENSPPAPDSEEKECVWDASLPPSGNVSPLSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGLLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRTRDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNIDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRRPKADPGLPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRAVECDVAAKFEPVDTVGVGINNSSKRMAGNNDMKSGGKYLDFEFF* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01394 761 Gene3D Phosphorylase Kinase; domain 1 364 449 - -
Lapu1g01394 761 Gene3D Transferase(Phosphotransferase) domain 1 450 517 - -
Lapu1g01394 761 MobiDBLite consensus disorder prediction 35 60 - -
Lapu1g01394 761 SUPERFAMILY Protein kinase-like (PK-like) 348 716 IPR011009 -
Lapu1g01394 761 FunFam serine/threonine-protein kinase D6PK-like 593 716 - -
Lapu1g01394 761 MobiDBLite consensus disorder prediction 207 248 - -
Lapu1g01394 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Lapu1g01394 761 FunFam serine/threonine-protein kinase D6PK-like 450 517 - -
Lapu1g01394 761 MobiDBLite consensus disorder prediction 295 343 - -
Lapu1g01394 761 PANTHER FLIPPASE KINASE 1-RELATED 140 721 - -
Lapu1g01394 761 SMART serkin_6 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01394 761 Pfam Protein kinase domain 595 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01394 761 Pfam Protein kinase domain 367 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01394 761 ProSiteProfiles Protein kinase domain profile. 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01394 761 FunFam Serine/threonine-protein kinase D6PK-like 364 449 - -
Lapu1g01394 761 CDD STKc_phototropin_like 364 716 - -
Lapu1g01394 761 MobiDBLite consensus disorder prediction 295 339 - -
Lapu1g01394 761 MobiDBLite consensus disorder prediction 207 232 - -
Lapu1g01394 761 MobiDBLite consensus disorder prediction 88 114 - -
Lapu1g01394 761 Gene3D Transferase(Phosphotransferase) domain 1 593 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01394 Lapu-Chr1 26756378 26761519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01394 1 761 AGC Kinase Gene Family AT2G44830 66.285 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu1g01394 Pkinase 8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01394 - - gmx:100800019 1398.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00803 10 9797556 9803587 Lapu1g01394 1 26756378 26761519 PCT