Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01385 ATGGATCCCTTTAAAGGACAAGGAGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCACAACACATTGTTTCTAATGCAAGAAATTTAAGGACACAAAGGTTGAAGCAGGCAAAGGAAGAAGCTGAGAGGGAGGCTGCACAATACAGATCTCACATGGAAGATGAGTATCAAAATTCAATTTCAGAGACCACTGGGAATTCAGGATCTAATGTAAAAAAACTTGAGGAGGAGACAGAGGCTAAGATTAATGATTTAAAGACATCAACTTCAAAGGTCTCATCAGAAGTGGTTGATATGCTGCTCAAGTGTGTTACAAATATCAAAACATAA 333 0.3874 MDPFKGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKEEAEREAAQYRSHMEDEYQNSISETTGNSGSNVKKLEEETEAKINDLKTSTSKVSSEVVDMLLKCVTNIKT* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01385 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 57 IPR028987 -
Lapu1g01385 110 Coils Coil 32 59 - -
Lapu1g01385 110 MobiDBLite consensus disorder prediction 53 72 - -
Lapu1g01385 110 NCBIfam V-type ATPase subunit G 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lapu1g01385 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lapu1g01385 110 MobiDBLite consensus disorder prediction 36 52 - -
Lapu1g01385 110 FunFam V-type proton ATPase subunit G 3 110 - -
Lapu1g01385 110 Gene3D - 3 110 - -
Lapu1g01385 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lapu1g01385 110 MobiDBLite consensus disorder prediction 36 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01385 Lapu-Chr1 26661844 26662474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01385 8 108 Primary Pumps ATPases(2) AT4G23710 53.465 2.18e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01385 K02152 - gmx:100818549 175.252