Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01368 ATGGCAATGATGAAAGATAACATTATAGAGGTGAGCATTGGGAGGAGCCAAATGTCTGTGGCAGAAGGTGAGCTCCAAGCAACACGGTGTGTCAAGAGACGAAGAAGAGAGGTTGCTGCAGCAGTTAGCAGTGGTGATGATAACCACCACCAACAGTTACCAAAACAACATGTTGGTGAAAATTCTACAATCAACACAACAAAGAGAAGCTCAAAATTTCGTGGTGTTAGCAGACATAGGTGGACTGGTCGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAGAAGAAAAAAGGGAAGCAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCAGCTGCCAGAGCATATGATTTAGCAGCAATTAAGTATTGGGGAACTTCAACTTTCACCAATTTTCCAATATCTGATTATGGGAAAGATATAGAAATAATGCAGACTATGACCAAAGAGGAGTATTTGGCCACTTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTGTCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAGTATCTCTACCTTGGCACCTACGGCACCCAAGAGGAAGCGGCAAGAGCTTATGACCTAGCAGCCATTGAGTACAGAGGGATTCATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCTGGAGGAGTAAACACCCCAGAAGCAAAACTTGAAGCACATGCAGTACTAGCGCGTCAAAAGGTGGCATCCCCATCAAACTATGCTCTAACGGAAGAGTCAAAGTCTTCGGCCATTCACAACAGTTTTTTCAGTCTAGATTCTCTGAATTCCCCAGTAGGGCAAGAAAATTTTGGAAACAAAACCTACTCATTCTCAAGCAGTAAGTCATCTTCTCCCACTGCACTTGGCCTTCTTCTGCGGTCTTCGTTGTTTAGAGAATTAGTGGAGAAGAATTCAAATGTATCTGGGGATGAAGCTGATGGGGAAGTCACAAAGGGTGAACAGCCACACATAGGTAGTGATGATGATCTGGGTGGAATATTCTTTGATAGCATTGGTGATATCCCATTTGTCTGCGATCCCAATAGATACAGCTTGGAATTGCAAGAAAGAGACCTGCACTCAATATTTTGA 1179 0.4292 MAMMKDNIIEVSIGRSQMSVAEGELQATRCVKRRRREVAAAVSSGDDNHHQQLPKQHVGENSTINTTKRSSKFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAAIKYWGTSTFTNFPISDYGKDIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDLAAIEYRGIHAVTNFDLSTYIKWLKPGGVNTPEAKLEAHAVLARQKVASPSNYALTEESKSSAIHNSFFSLDSLNSPVGQENFGNKTYSFSSSKSSSPTALGLLLRSSLFRELVEKNSNVSGDEADGEVTKGEQPHIGSDDDLGGIFFDSIGDIPFVCDPNRYSLELQERDLHSIF* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01368 392 MobiDBLite consensus disorder prediction 45 71 - -
Lapu1g01368 392 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 51 301 - -
Lapu1g01368 392 ProSiteProfiles AP2/ERF domain profile. 72 138 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 SMART rav1_2 72 144 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 FunFam AP2-like ethylene-responsive transcription factor 173 234 - -
Lapu1g01368 392 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 Pfam AP2 domain 71 130 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 SUPERFAMILY DNA-binding domain 71 140 IPR016177 GO:0003677
Lapu1g01368 392 CDD AP2 71 140 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Lapu1g01368 392 FunFam AP2-like ethylene-responsive transcription factor 71 140 - -
Lapu1g01368 392 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Lapu1g01368 392 Gene3D AP2/ERF domain 71 140 IPR036955 GO:0003700|GO:0006355
Lapu1g01368 392 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Lapu1g01368 392 MobiDBLite consensus disorder prediction 41 75 - -
Lapu1g01368 392 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01368 Lapu-Chr1 26458399 26460429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01368 148 238 AP2-EREBP Transcription Factor Family AT5G17430 41.000 4.79e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lapu1g01368 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01368 - - gmx:100779867 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01368 1 26458399 26460429 Lapu1g01368 1 26458399 26460429 ECH