Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01357 ATGAAAATCCACGAGCAATGCACTGTTGCCCCTCCTCCATCGGCAACCCAAACATCCCTCACTCTCACTTTCTTTGATTTATTTTGGCTCAGGATCCAGCCCCTTGAGCTCACATTCTTCTATTCCCTCCCTCCTCATCAATCAAATCCTTATCTTTTCTTTGGCAATGTGGTTCCAAAACTCAAAACATCTCTCTCTCACACCCTCCAACACTTCCTCCCTCTCGCTGGAAAAGTCGTTTGGCCTTCCGATTCCCCGAAACCCATTGTCCAATTCACACCTGGCGATGCTGTTTCCGTGGTGGTTTCTGAGTCCGATGCTGAATTCAATGACGAGATAGATTACTCACCCCGTGAAACACCACGGTCTCATCCTTTGGTACCCCACTTGCACTCGTCGGAATCTTTTGCTTCTGTTATGACTATTCAGATCACTCTCTTTCCTAACAAAGGATTCAGCATAGGCATGAGCACCCACCATGCTGTCCTTGATGGAAAATCTGCAGCTATGTTCATCAAGGCTTGGGCTTCTCTACACCAAAGCCAAACCAACGATGAAACACAAATACCATCTTTGGTGCCAGAGTTGGAGCCTTCCTTTGACAGAATCCTCATCAAAGAACCAACACATTTGGGAGCTGATTTAACAGAAAATTTGACGGGCTTCTTATCCAATATGTTCCGTCAAGATAACAGCGACGGGCGATGCTTGAAGATTCTACCTTTCCCACCAATACCCAAAGATTTGATTCGGGCCACGTTCGTTCTCACACGAGGGGATTTGGAGAAGATAAAGAGAAGGGTCTTGTCCAAGTGGGAGGAAACGGAAGAATCAAAATCAACCGTTTCTTCAAAGCCACATAATTTATCTTCCTTTGTTGTCACCTGTGCTTATGTGACAGTTTGCATGGCAAAAGCCATTCACGGAGTTGAAAGGGAGAAACAAAGGTTTGCTTTTGGGTTCGCTGCGGATTGGAGGTTCAGGTTAGAACCTCGAATCCCTGATAACTATTGTGGGAACTGTGTGTGGAACAATTTGGTGGATGCAGATCAGTTGGACTATATAAAGGAAGAAGGGGTGGTGATTGTTGCTAAGTGCATTCATAGAAATGTAAAGATATTAGACCAGGGGGCAGTTTTTGAAGGGTTTTCTCAATACCTGGATTTGTTAAAACAAGGGGTACAAATAATTGGAGTAGCAATGTCTAACCGATTTGGAGTTTATGATACTGATTTTGGTTTTGGAAAGCCCGCTAAGGTGGAGATAACATCGTTGGATAAAAGTTCATCTCGAGTCATTGGGTTGACAGAGAGCAAGGATGGGAGGGGTGGGGTTGAAGTTGAGCTGGTTCTGAATAAACAAGTCATGGATCTCTTTGCTACTCTCTTTCGTGAAGGATTGTGTGATGATGATGATTGA 1419 0.444 MKIHEQCTVAPPPSATQTSLTLTFFDLFWLRIQPLELTFFYSLPPHQSNPYLFFGNVVPKLKTSLSHTLQHFLPLAGKVVWPSDSPKPIVQFTPGDAVSVVVSESDAEFNDEIDYSPRETPRSHPLVPHLHSSESFASVMTIQITLFPNKGFSIGMSTHHAVLDGKSAAMFIKAWASLHQSQTNDETQIPSLVPELEPSFDRILIKEPTHLGADLTENLTGFLSNMFRQDNSDGRCLKILPFPPIPKDLIRATFVLTRGDLEKIKRRVLSKWEETEESKSTVSSKPHNLSSFVVTCAYVTVCMAKAIHGVEREKQRFAFGFAADWRFRLEPRIPDNYCGNCVWNNLVDADQLDYIKEEGVVIVAKCIHRNVKILDQGAVFEGFSQYLDLLKQGVQIIGVAMSNRFGVYDTDFGFGKPAKVEITSLDKSSSRVIGLTESKDGRGGVEVELVLNKQVMDLFATLFREGLCDDDD* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01357 472 PANTHER - 1 467 - -
Lapu1g01357 472 Gene3D - 1 226 IPR023213 -
Lapu1g01357 472 Pfam Transferase family 4 460 - -
Lapu1g01357 472 Gene3D - 245 468 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01357 Lapu-Chr1 26384269 26386176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01357 1 465 Monolignol Biosynthesis Gene Families AT5G48930 23.542 3.04e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01357 - - gmx:100815354 573.163