Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01346 ATGGAAGGTACCACCCAAAACACGTTTACCTTCGTCACTAACACCATCGACCTACCAAGTTCAAGCACCCCCGAGATATCTCCATCTCCTGGTTCTCTTGCAAGACTCGCACAAAGTTACCCTCCGGGCTTTCCCAGAAAGGTGTTTGCGGAGGTTATAGGAACGTTTCTTTTGGTGTTCGTGGGAAGTGGCTCTGCTGGTCTCAGTGTTATTGATGAGAGCAGGGTGTCAAAGCTTGCAGCTTCACTCGCAGCAGGGCTCATAGTGACTGTGCTGATTTACTCAATTGGACACATCTCAGGGGCACACATGAACCCTGCGGTTTCCCTTGCTTTTGCTGCGGTGAGGCATTTTCCGTGGCCACAGCTTCCGTTTTACGTAGCAGCTCAACTCACTGGAGCCATTTCTGCTTCATACACATTGCGAGAGCTTTTCCAGCCATCAAAGGAAATTGGGGGAACATCACCTGCTGGATCACATATTCAAGCACTGATCATGGAAATGGTGACTACTTTCACCATGGTGTTCATTTCCATGGCCGTGGCTACTGACTCAAACGCTACAGGACAACTATCAGGAGTAGCAGTAGGTTCTTCTGTTAGCATATCAAGCATTGTTGCCGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCAACTTCATCCTACAAGGGACTTTGGGTATATTTTGTTGGACCAATTACTGGGGCAGTTTTAGCAGCATGGTCTTACAATGTGATTAGGGACACGGAACACCCTGGTTTTCCATTTTCACTATCCTCCCTTTCATTCAAGGTACGCCAAAGCATTAGTGGAACTGAACAGGTTGGTAAAACCGACCACCAATGCTTGGTTTGA 879 0.4778 MEGTTQNTFTFVTNTIDLPSSSTPEISPSPGSLARLAQSYPPGFPRKVFAEVIGTFLLVFVGSGSAGLSVIDESRVSKLAASLAAGLIVTVLIYSIGHISGAHMNPAVSLAFAAVRHFPWPQLPFYVAAQLTGAISASYTLRELFQPSKEIGGTSPAGSHIQALIMEMVTTFTMVFISMAVATDSNATGQLSGVAVGSSVSISSIVAGPISGGSMNPARTLGPAIATSSYKGLWVYFVGPITGAVLAAWSYNVIRDTEHPGFPFSLSSLSFKVRQSISGTEQVGKTDHQCLV* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01346 292 Pfam Major intrinsic protein 44 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu1g01346 292 Gene3D Glycerol uptake facilitator protein. 29 260 IPR023271 -
Lapu1g01346 292 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu1g01346 292 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu1g01346 292 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu1g01346 292 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu1g01346 292 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu1g01346 292 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu1g01346 292 SUPERFAMILY Aquaporin-like 40 260 IPR023271 -
Lapu1g01346 292 PANTHER AQUAPORIN NIP2-1 36 259 IPR034294 -
Lapu1g01346 292 ProSitePatterns MIP family signature. 103 111 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01346 Lapu-Chr1 26200307 26204391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01346 46 260 Major Intrinsic Protein MIP AT5G37820 49.074 5.40e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01346 K09874 - gmx:100788071 445.277