Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01344 ATGTCAAAAAAACTTTCGTACAACCCTTCCTTGAGCGTACCCTTACTTCTAAATGATGAGGAGAAAGCCATAGCCTCTCATGCTTCTGCAAAAAATACTGTATCCTTCTTTCGCACCTGTCTTAACGGACTCAATACAATAGCAGGTGTTGGCATACTCTCAGTTCCATATGCTCTTGCTTCAGGAGGCTGGTTAAGCTTGGCTCTTCTGTTTGCTATTGCCGGTGCTGCATTTTACACGGGCCTTTTGATTAAAAGATGTATGGATAAGAACTCAAACATTATAACCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGAAGGTTAATAGTGTCCGTATGCATGTACACAGAACTCTATTTAGTTTCAATAGGATTCTTGATTCTTGAAGGTGATAACTTGAGTAACATGTTCCCCATTGGGGAGGTTCAGATAGCCGGCTTAGCAATTGGTGGGAAGCAATTTTTTGTGATAATGGTTGCCTTTATCATCTTGCCCACAGTTTGGTTGGATAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTCTTTGCTTCTGCTCTCATCATCGTTTCAATAACATGGACTTCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTGAATTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTTCCCACATTGTACAATTCCATGACAAACAAACATCAGTTCTCTAACGTCCTACTTGTATGTTTTCTCCTAACCACTGTTGGTTATGCATCCATGGCTATAATTGGTTACTTAATGTTTGGTGATGAGGTTGAATCACAAGTAACATTAAACCTGCCTTTGGACAAAGTTAGCTCAAAATTAGCAATATACACGACCTTGGTCAATCCCATATCCAAGTTTGCGTTGATGGCAACACCTATTACAAATGCTTTGAAAGACTTGCTTCCAAGGACGTACAAGAATAGGGTGACAAGCATCTTAGTAAGCACAGTCTTGGTAATGAGCACTACCATTGTTGCCCTTGCTGTTCCTTTCTTTGGGTCTCTCATGTCCCTGGTTGGAGCCTTTCTAAGTGTCACAGCTTCGATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCAGGCACTTACAGGAAATTTGGGTGTGAGACGGTAGCCATAGTGATAATAATAATAGCAGCTATAATAATGGCAATTTCTGGAACCTACATCTCTCTCAAGGAAATAGCCCACAGTTTGTAA 1269 0.4066 MSKKLSYNPSLSVPLLLNDEEKAIASHASAKNTVSFFRTCLNGLNTIAGVGILSVPYALASGGWLSLALLFAIAGAAFYTGLLIKRCMDKNSNIITYPDIGELAFGKTGRLIVSVCMYTELYLVSIGFLILEGDNLSNMFPIGEVQIAGLAIGGKQFFVIMVAFIILPTVWLDNLSLLSYVSASGVFASALIIVSITWTSTFDGVGFHHKGTLVNWNGLPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIIGYLMFGDEVESQVTLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPRTYKNRVTSILVSTVLVMSTTIVALAVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGCETVAIVIIIIAAIIMAISGTYISLKEIAHSL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01344 422 Pfam Transmembrane amino acid transporter protein 33 413 IPR013057 -
Lapu1g01344 422 PANTHER OS05G0424000 PROTEIN-RELATED 41 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01344 Lapu-Chr1 26170059 26171545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01344 20 422 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.168 9.02e-174 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01344 K15015 - gmx:100794374 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01344 1 26170059 26171545 Lapu1g01344 1 26170059 26171545 ECH