Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01323 ATGGAAAACGTTTACAAACCAAGGAAGGAAAACCAGCAGTTTAAGTTGCCAACGGGATTCAGATTTCATCCTACGGAAAGGGAACTCATAAAAGACTACCTGACGAGGAAGGTTGCTGACAACTGTTTCTGTGCTGTGGCCATTGCTGAGGTTGATTTGAACAAGTGCGAGCCATGGAATTTGCCTGGATTGGCTAAAATGGGTGAAACTGAGTGGTATTTTTTCAGTGTGAGGGACAAAAAATACCCAACTGGTTCAAGGGCTAATAGGGCTACTGATGCTGGTTATTGGAAAGCCACAGGCAAAGACAGGGAGATAATAGCGGAAAATGCACTCATTGGGATGAAAAAAACCTTAGTTTTCTACAAGGGAAGAGCTCCAAGAGGTGAAAAGACAAACTGGGTTATGCATGAATATAGGTTGGAAGGGAAACATGATCAAACTGCAAAGAGCGAATGGGTGGTCTGTAGAGTCTTTGACAAGGGTCCTGGTGGAAAGAAATTGCATGTTCCAAAGTGTGGGAGGTTCAATTCCTCTGGAAAGGAATCATCATCTCCTTCTTCTCTATTGCCTCCTTTGATGGATTCTCCTCCATACAACAGTGAAACAAGAACCACGGCTCGTGAGTTGTCTCAGGTGACCAGCTGCGATCCAAATCAAACTGTGGATCAGAACACACATGATCACATTGTTGATAGCTTGGAAACTCCTATTTTGGACTTTTCATCCTCTGCAAGTCCTTTTGATGTTTTCCCTTTTAGCAAACCAACCCTTTCGAACCAAAACCAATCACAGCAGATTGCACACCAAATTGGGAACTCACCGTACCCTGATTATTGTTATATGCCTCGACAACAGTCCATGTTAAGCATGTTGATCGGAAACCATGAATCAAGTGCAAAGCAGGTTCAGAAAGCAGAGTTTTCTGAGGGAAGAGACTTTGATGCTGATATCTCATCTTTGTTATACAACAGTGACATGATGATACAAAAAATGTTTGGGAATCAAGAACATTCATCAGCTTCTGCAGGGCATGTGGACACTAATTGTGTGTGGAATTACTGA 1065 0.4263 MENVYKPRKENQQFKLPTGFRFHPTERELIKDYLTRKVADNCFCAVAIAEVDLNKCEPWNLPGLAKMGETEWYFFSVRDKKYPTGSRANRATDAGYWKATGKDREIIAENALIGMKKTLVFYKGRAPRGEKTNWVMHEYRLEGKHDQTAKSEWVVCRVFDKGPGGKKLHVPKCGRFNSSGKESSSPSSLLPPLMDSPPYNSETRTTARELSQVTSCDPNQTVDQNTHDHIVDSLETPILDFSSSASPFDVFPFSKPTLSNQNQSQQIAHQIGNSPYPDYCYMPRQQSMLSMLIGNHESSAKQVQKAEFSEGRDFDADISSLLYNSDMMIQKMFGNQEHSSASAGHVDTNCVWNY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01323 354 FunFam NAC domain-containing protein 100-like 25 164 - -
Lapu1g01323 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 259 - -
Lapu1g01323 354 SUPERFAMILY NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Lapu1g01323 354 ProSiteProfiles NAC domain profile. 16 161 IPR003441 GO:0003677|GO:0006355
Lapu1g01323 354 Gene3D NAC domain 25 163 IPR036093 GO:0003677|GO:0006355
Lapu1g01323 354 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Lapu1g01323 354 MobiDBLite consensus disorder prediction 175 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01323 Lapu-Chr1 25987725 25989164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01323 16 354 NAC Transcription Factor Family AT5G07680 46.686 3.18e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu1g01323 NAM 6.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01323 - - gmx:100782172 520.005