Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01312 ATGGCAGCGTGCATATTCACGGTTTCACAGGATGGAACCGCTGATTTCCTAACGGTGCAGGAGGCGATCGACGCCGTGCCGCTTGGCAACATTCGCCGGACGGTGATTCGGGTCTCGCCGGGAATCTATCGGCAACCGGTGTACATCCCCAAGACCAAGAATTTCATCACTCTCGCTGCTCTGTCCCCTGAGGACACTGTCCTTACCTGGAACAACACTGCCACCGGAATCAATCACCATCAACCTGCGAGGATGATAGGGACTGGGACGTTTGGTTGCGGAAGTACCATTGTGGAAGGCGAGGACTTTATTGCTGAGAATATTACTTTTGAGAATTCTGCCCCTCAGGGTTCAGGGCAAGCAGTTGCAATTAGAGTAACAGCAGATCGATGTGCCTTCTACAATTGTCGGTTCCTTGGATGGCAGGACACATTGTACTTACATTACGGTAAACAATATTTGAAAGATTGTTACATTGAAGGAAGTGTGGACTTCATCTTTGGCAATAGCACTGCACTTTTGGAGCATTGCCATATCCACTGCAAGTCTGAGGGCTTCATAACTGCACAGAGCAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTTAAGATGCGTTATCACAGGTAATGGAAGAAATTCGTATGCATATCTTGGACGACCGTGGGGCCCTTTTGGAAGGGTAGTCTTTGCGTACACTTACATGGATCAGTGTATAAGACATGTTGGCTGGGATAACTGGGGGAAAATGGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCACCGAAGCGAGTAACATGGTGTAGAGAATTGTTGGAGGAAGAAGCTATGCAGTTTCTCTCACATCCTTTCATCGATCCAGAACCAGAGAAACCTTGGCTTGCTCAAAGGATGGCCCTCAGAATTCCATATTCTGCTTGA 951 0.4721 MAACIFTVSQDGTADFLTVQEAIDAVPLGNIRRTVIRVSPGIYRQPVYIPKTKNFITLAALSPEDTVLTWNNTATGINHHQPARMIGTGTFGCGSTIVEGEDFIAENITFENSAPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGRNSYAYLGRPWGPFGRVVFAYTYMDQCIRHVGWDNWGKMENERSACFYEYRCFGPGCCPPKRVTWCRELLEEEAMQFLSHPFIDPEPEKPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01312 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Lapu1g01312 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Lapu1g01312 316 Gene3D - 3 310 IPR012334 -
Lapu1g01312 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 298 - -
Lapu1g01312 316 FunFam Pectinesterase 2 309 - -
Lapu1g01312 316 SUPERFAMILY Pectin lyase-like 3 298 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01312 Lapu-Chr1 25882406 25886395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01312 5 309 Carbohydrate Esterase AT5G47500 38.291 5.89e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01312 K01051 - gmx:100786786 649.047