Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01305 ATGTCCACTCCCAACGCCGACTCCGGCACGGCGCCGCATCCGCGACCTACCATCACACTCCCTCCACGTCCCTCCGCGGAGGCCTTTTTCTCCGCCGGCGGCGGCGCTAGCCCCGGTCCCATGACCCTCGTATCTAGCTTCTTCGGTTCCGATGCCGCCGCTGACTGCCGCTCCTTCTCCCAGCTCCTAGCCGGCGCCATGGCCTCCCCGATGGCCTTCTCCGCCGCCGTAGCCGACAACTCCGGCAAGGACGACGATGGGCCCCACAAGGGCTTCAAGCAGAGCAGACCCATGAATTTGGTCATTGCTCGTTCGCCCGTCTTCACTGTCCCACCCGGGTTGAGCCCTTCTGGGTTTCTTAACTCCCCTGGCTTCTTTGCCCCTCAGAGCCCCTTTGGGATGTCTCACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCATATGCACATGCAAGCTGATTACCAGATGCATGCAGTAACGGCTCCTACTGAACCACCTGTACAGCAGCCATCTTTCTCTCTAAATGAAGCTTCAGAGCAGCAAGTAGTTTCATCTGTATCAGAACCTAAAAATGCTCAACTGGAAACGACAGATATGTTGCAGGCTGATAAGAAATATCAGCCATCTTCCCAGGCCATTGACAAACCTGCAGATGACGGCTACAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGCAGCGAGTATCCACGAAGCTACTACAAATGTACACATCTGAATTGCCTAGTGAAGAAAAAAGTCGAGCGTGCTCCTGATGGTCACATAACTGAAATTATCTACAAAGGTCAGCATAACCATGAAAAGCCTCAGGCAAATAGACGTGTCAAGGATAATAGTGATTCAAATGGAAGTGCAATTGTTCAGCCTAAGTCTGAGTCAAACTCACAAGGTTGGGTTGGACAACAAGTAAACAAGTTTAGTGAAAACATTCCTGATTCTTCGGTTCCTGAAAGTGACCAGACCTCCAATCAAGGGGCTCCTAGGCAACTACTACCTGGGTCAAGTGAGAGTGAGGAAGTGGGTGATGTAGATAATAGGGAAGAGGCAGATGACGGTGAGCCCAACCCTAAGAGAAGGCAAGCTAAAATTCTGCTTTTCAGGAATACTGATCTTGCGGCATCTGAAGTACCTCTGTCTCAGAAGACTGTCACAGAACCCAAGATAATTGTGCAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGCTACAGGTGGAGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACAAGTGCTGGATGCAACGTGCGTAAGCATGTTGAGAGAGCTTCAACCGACCCCAAAGCTGTCATAACCACGTATGAGGGTAAGCATAATCATGATGTGCCTGCTGCTAGAAATAGCAGCCACAACACAGCTAGTAGCAATTCAATGCCATTAAAACCTCACAATGTGGTACCGGAGAAGCACCCTTTGCTTAAAGATATGGATTTTGGAAGTAATGACCAAAGACCTGTACATTTGCGCTTAAAAGAAGAGCAAATAATAGTATAA 1581 0.4921 MSTPNADSGTAPHPRPTITLPPRPSAEAFFSAGGGASPGPMTLVSSFFGSDAAADCRSFSQLLAGAMASPMAFSAAVADNSGKDDDGPHKGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFAPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADYQMHAVTAPTEPPVQQPSFSLNEASEQQVVSSVSEPKNAQLETTDMLQADKKYQPSSQAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCLVKKKVERAPDGHITEIIYKGQHNHEKPQANRRVKDNSDSNGSAIVQPKSESNSQGWVGQQVNKFSENIPDSSVPESDQTSNQGAPRQLLPGSSESEEVGDVDNREEADDGEPNPKRRQAKILLFRNTDLAASEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASSNSMPLKPHNVVPEKHPLLKDMDFGSNDQRPVHLRLKEEQIIV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01305 526 FunFam WRKY transcription factor 212 283 - -
Lapu1g01305 526 MobiDBLite consensus disorder prediction 289 344 - -
Lapu1g01305 526 MobiDBLite consensus disorder prediction 210 229 - -
Lapu1g01305 526 MobiDBLite consensus disorder prediction 272 371 - -
Lapu1g01305 526 FunFam WRKY transcription factor 33 399 465 - -
Lapu1g01305 526 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 Pfam WRKY DNA -binding domain 413 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 ProSiteProfiles WRKY domain profile. 407 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 SMART WRKY_cls 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 SMART WRKY_cls 412 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 MobiDBLite consensus disorder prediction 272 288 - -
Lapu1g01305 526 SUPERFAMILY WRKY DNA-binding domain 404 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 SUPERFAMILY WRKY DNA-binding domain 222 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 MobiDBLite consensus disorder prediction 468 491 - -
Lapu1g01305 526 MobiDBLite consensus disorder prediction 1 33 - -
Lapu1g01305 526 MobiDBLite consensus disorder prediction 474 490 - -
Lapu1g01305 526 Gene3D WRKY domain 397 473 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 Gene3D WRKY domain 209 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01305 526 MobiDBLite consensus disorder prediction 168 197 - -
Lapu1g01305 526 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 121 487 IPR044810 GO:0003700
Lapu1g01305 526 ProSiteProfiles WRKY domain profile. 218 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01305 Lapu-Chr1 25816740 25821925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01305 15 524 WRKY Transcription Factor Family AT2G03340 51.763 1.06e-146 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu1g01305 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01305 - - gmx:100796679 951.429