Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01288 ATGTATACGTTCTGGGTGGCTTGCCGTTTGTTTATGAATGTTGATGATCCGATCCAAGTGGCAAAATTGGCAGATTCTTTCAATAGAATAGCCCCAGGAATCATGTCAGTGCCCATTGACTTGCCCGGAACTCCGTTCAACAAAGCCATCAAGGCCTCGAAGTTCATTAAGGAGAAACTGTTGGAGATTATCAGAGAGAGGAGAGAGGATTTGGCTAATGGAAGAGCCTCATTAACACAAGACATTTTGTCTCACATGTTATCATCATGCGATGAGAATGGAAAATATATGAATGAACAATATATTGCTGACAAGATCCTTGGCCTGTTGATAGGAGGCCACGACACTGCAAGTTCTGCATGCACTTTTGTCGTCAAATACCTTGCTGAACTCCCTCCCAATATTTATGAAAATGTCTATCAAGAACAAATGGAGATTGCAAAATCAAAAGCTGAGGGAGAATTGTTGAATTGGGATGACATTCAGAAGATGAAATATTCGTGGAATGTTGCGTGTGAAGTAATGAGGCTCGCCCCTCCACTCCAAGGGGCGTTTAGGGAAGCCATGGATGACTTCATCTTCAATGGATTCTCAATTCCAAAAGGCTGGAAGTTGTATTGGAGTGCAAGTTCAACACATAGAAATCCAGAGTGCTTCCCAGAGCCAGAGAAATTTGATCCAAGAAGATTTGAAGGAACAGGACCAGCTCCTTACACTTATGTGCCATTTGGAGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCTCGAATGGAGATATTGGTGTTCATGCACAACTTAGTGAAGAGATTCAAGTGGGAAGCTATTATTCCTAACGAGAATATCATCATTGATCCCATGCCTGTTCCTGCCAAAGGCCTTCCCGTTCGTCTTCTTCTCCACCAACCTTGA 912 0.4331 MYTFWVACRLFMNVDDPIQVAKLADSFNRIAPGIMSVPIDLPGTPFNKAIKASKFIKEKLLEIIRERREDLANGRASLTQDILSHMLSSCDENGKYMNEQYIADKILGLLIGGHDTASSACTFVVKYLAELPPNIYENVYQEQMEIAKSKAEGELLNWDDIQKMKYSWNVACEVMRLAPPLQGAFREAMDDFIFNGFSIPKGWKLYWSASSTHRNPECFPEPEKFDPRRFEGTGPAPYTYVPFGGGPRMCPGKEYARMEILVFMHNLVKRFKWEAIIPNENIIIDPMPVPAKGLPVRLLLHQP* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01288 303 CDD CYP90-like 2 298 - -
Lapu1g01288 303 Gene3D Cytochrome P450 1 300 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 Pfam Cytochrome P450 41 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 PANTHER CYTOCHROME P450 26 2 290 - -
Lapu1g01288 303 FunFam Taxadiene 5-alpha hydroxylase 1 301 - -
Lapu1g01288 303 PRINTS P450 superfamily signature 250 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 PRINTS P450 superfamily signature 241 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 PRINTS P450 superfamily signature 112 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 PRINTS P450 superfamily signature 169 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 243 252 IPR017972 GO:0005506|GO:0016705
Lapu1g01288 303 PRINTS E-class P450 group I signature 240 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 PRINTS E-class P450 group I signature 250 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 PRINTS E-class P450 group I signature 101 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 PRINTS E-class P450 group I signature 208 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g01288 303 SUPERFAMILY Cytochrome P450 2 298 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01288 Lapu-Chr1 25664976 25667257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01288 2 205 Cytochrome P450 AT5G36110 57.353 1.36e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01288 K20667 - cave:132184488 499.975