Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01277 ATGGCTGTAGAGGAGTCTGAGCCTGTGATTGGAGAACTTGAAAGAGAGGAGAACTTGATTGCTGCAGTAAGGCATATTGTGAAGGCACTTGGGCCAAATAAGACCCTTACCAGTGATGCCAAGAAAATTCTGGCAGATCTTGGGAGTAGATTATCCTCCATGTCTATACCTAGTGAGAAGGAGGAGGGGAAACAAGGCCAAGCAGGGGAGAGTCATGACGGTGGTGCTGATCATGATGATGATGATGATGATGATGAGGGTCTTAGTGCTATTGAAGAAAGGCTTAATGTGATTCAGGAGAAAATTATGAGATGGGAGGAGGATCAGTCCATGATTTGGGATTTGGGAACTGAAGAAGCATCTGAGTATCTGAATGCTGCTAACGAAGCTCGCAGGTTGATTGAGAAGTTGGAAAGTTTGCATTTGAAGAAAGAGGATCAAGAGTACGAGTTTATGCAGAGGGCTTATAGTGTCCTGCAAACGGCTATGGCACGCCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAACAGGCAACCTTTTGAGCCTGAATATGTCTCTTTTCGGTCCAGTGAGGAAGATGCTGTTGATGAGAACTCCATAATCTCTATAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTGAGCAGAGCGTCGGAGGAGCATATCATTGATTTGGTTCATCCAGCCGTGATAGCGGATCTCAGGTGTATTGCAAACTTACTTTTTGCTTCTAATTATTGCCAGGAATGTTCCAATGCTTATATCATTGTCCGAAGGGATGCGCTGGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGCATCGAGGACGTCTTGAAAATGCAGTGGGGTACTTTGAATTCCAAAATCAAAAGATGGATTTGGGCTGTGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGATGGCTTAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTTAGTGTAGCTTGTTTTGTTGATGCATCTAAGGCTTCAATATTGCAGCTTCTGAATTTCGGTGAGGCCATGTCCATTGGCCCTCACCAACCTGAGAAATTGTTCCGTGTTCTTGACATGTATGAGGTTCTACAAGACCTTATGCCAGACATTGATACTTTGTATTTAGATGAGGTTGGTTCCTCGGTTAAAATTGAATGTCATGAAGTTCTGAAGAGATTAGGCGATTGTGTGAGGGCAACATTTTTTGAATTTGAAAATGCCATTGCAACAAATGCATCATCAACCCCTTTTGTGGGTGGTGGTATACATCCTTTAACCAAATATGTTATGAATTATCTTAGAACCCTTACCGACTACAGTGACATACTCAATCTACTTCTGAAGGACCAAGAAGAAGACGAATCCATTTCGCTGTCACCTGACATGAGCCCTGGTACAGAAGAAGATAGCAGAAGCCAGGGATCTCCATGTAGAGTTTCCTCAATGGCCCTTCACTTTCGATCAATCGCATCGATCTTGGAAAGCAACCTTGAGGAGAAGTCCAAGTTATACAAAGAAGTCTCCTTGCAGCACTTGTTCTTGATGAACAACCTACATTATATGGCTGAAAAGGTCAAGGGGTCTGAACTCAGGCTCGTATTTGGAGATGAATGGATTCGAAAGCGCAATTGGAAGTTTCAGCAGCACGCAATGAAATATGAGAGGGCTAGTTGGAGTTCCATTCTTTTCTTACTTAAGGATGAAGGAATTCTTGTTCCAGGTACAAATTCGGTCTCAAAAAGTCTTCTTAAAGAGAGGCTACGAAGCTTCTACCTTGGCTTTGAGGATGTTTACAGGATCCAGACAGCTTGGCTTATCCCAGATATTCAGCTTCGGGAAGATTTACGGATTTCTATATCTCTCAAAGTCATCCAAGCTTATAGAACTTTTGTTGGAAGGCATAACAGTAACATAAGTGACAAAATCATTAAGTATACTGCTGATGATTTAGAAAACTACCTTTTGGATTTCTTTGAAGGATCTCAAAAGTGGTTGCAAAATCCTCATAGAAGGTGA 2037 0.4227 MAVEESEPVIGELEREENLIAAVRHIVKALGPNKTLTSDAKKILADLGSRLSSMSIPSEKEEGKQGQAGESHDGGADHDDDDDDDEGLSAIEERLNVIQEKIMRWEEDQSMIWDLGTEEASEYLNAANEARRLIEKLESLHLKKEDQEYEFMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDAVDENSIISIGDESVEESLQRDSVSRASEEHIIDLVHPAVIADLRCIANLLFASNYCQECSNAYIIVRRDALDECLFILEMERLSIEDVLKMQWGTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVSVACFVDASKASILQLLNFGEAMSIGPHQPEKLFRVLDMYEVLQDLMPDIDTLYLDEVGSSVKIECHEVLKRLGDCVRATFFEFENAIATNASSTPFVGGGIHPLTKYVMNYLRTLTDYSDILNLLLKDQEEDESISLSPDMSPGTEEDSRSQGSPCRVSSMALHFRSIASILESNLEEKSKLYKEVSLQHLFLMNNLHYMAEKVKGSELRLVFGDEWIRKRNWKFQQHAMKYERASWSSILFLLKDEGILVPGTNSVSKSLLKERLRSFYLGFEDVYRIQTAWLIPDIQLREDLRISISLKVIQAYRTFVGRHNSNISDKIIKYTADDLENYLLDFFEGSQKWLQNPHRR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01277 678 PANTHER EXOCYST COMPLEX PROTEIN EXO70 87 667 IPR004140 GO:0000145|GO:0006887
Lapu1g01277 678 MobiDBLite consensus disorder prediction 51 86 - -
Lapu1g01277 678 Gene3D Exocyst complex component Exo70 103 673 - -
Lapu1g01277 678 MobiDBLite consensus disorder prediction 462 484 - -
Lapu1g01277 678 Coils Coil 88 108 - -
Lapu1g01277 678 MobiDBLite consensus disorder prediction 464 484 - -
Lapu1g01277 678 Coils Coil 120 176 - -
Lapu1g01277 678 Pfam Exo70 exocyst complex subunit 296 662 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu1g01277 678 SUPERFAMILY Cullin repeat-like 109 666 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01277 Lapu-Chr1 25576025 25579100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01277 12 678 EXO70 exocyst subunit family AT3G29400 49.559 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01277 K07195 - gmx:100799102 1225.31