Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01271 ATGGCTTCAAATAATGGCCGTAAAGCAAGTGAAATCTTTCAGGGTCAAGTTCACTTGTACAAACACTTGTTTGCCCATATAATAGATGGTATGAGTCTTAAATGGATCGTTGAGCTTGGCATACCAGACATAATCCACAACCATGGTCAACCCATTACACTTCCAAAGCTGGTGTCAATTCTACAAGTTTCACCAACTAAAGTTAGTGGCGTGGAGAGTCTCATGCGCAACCTAGCATGCAAGGGATTCTTTGAAATTGTTAGTGTCCATGAGAATATGGAAGAAAAGGAAGCCTATGCTCTAACTGCTGCATCAGAGCTTCTTGTCAAAGGCAGCGACATTTGTCTTGCACCGATGGTAGAGGGTTTTGTTGACCCAAGTTTAGCAGGCATATGGTCTCACTTGAAGAAGTGGACTTATGCAGATGATCTCACACTGTATGGTGCCTCTGTAGGGTCAAATCTGTGGGAGTTTCTTGATGAAAATCCTGCATGTAACAATTTATTCAATGAGACAATGGCTAGTGATTCTCGGATGATGAACATGGCATTGAGAGGTTGCAATTGGGTGTTTGAAGGAGTGGAGTCCATTGTGGATGTTGGCGGTGGAACTGGAATCACAGCCAAGACAATCTGTGAGGCATTTCCTAACATGAAATGCATCGTGTTGGAACGTCCACATGTTGTAGAAAACTTGTCAGGAACCAACAATTTGACATATGTTGGTGGTGATATGTTTGAATCTATTCCCAAGGCTGATGCTGTTCTACTTAAGTTGATTTTACATAATTGGAATGACAAGGATTGTAGAAAGATATTAGAAAATTGTAAAGAAGCTATTTCTGATAAAGGTAAAGGGGGAAAAGTAGTAGTGATAGATGTTGTGATAAATGAAAACGAAGATGAGGAAGAGCTTACTGCACTAAAACTTCTGATGAACGTAAGCATGGCATGTCTGATTAATGGAAAAGAGAGAAAAGAAGAAGAATGGAAGGAACTCTTCATGGAAGCAGGATTCCAAAGCTATAAAATATCTCCTCTGACAGGATATTTATCTCTTATTGAAATATATCCTTGA 1077 0.3983 MASNNGRKASEIFQGQVHLYKHLFAHIIDGMSLKWIVELGIPDIIHNHGQPITLPKLVSILQVSPTKVSGVESLMRNLACKGFFEIVSVHENMEEKEAYALTAASELLVKGSDICLAPMVEGFVDPSLAGIWSHLKKWTYADDLTLYGASVGSNLWEFLDENPACNNLFNETMASDSRMMNMALRGCNWVFEGVESIVDVGGGTGITAKTICEAFPNMKCIVLERPHVVENLSGTNNLTYVGGDMFESIPKADAVLLKLILHNWNDKDCRKILENCKEAISDKGKGGKVVVIDVVINENEDEEELTALKLLMNVSMACLINGKERKEEEWKELFMEAGFQSYKISPLTGYLSLIEIYP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01271 358 Pfam O-methyltransferase domain 132 340 IPR001077 GO:0008171
Lapu1g01271 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Lapu1g01271 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Lapu1g01271 358 Gene3D - 1 108 IPR036388 -
Lapu1g01271 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Lapu1g01271 358 CDD AdoMet_MTases 197 296 - -
Lapu1g01271 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 108 - -
Lapu1g01271 358 FunFam O-methyltransferase ZRP4 110 358 - -
Lapu1g01271 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Lapu1g01271 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Lapu1g01271 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Lapu1g01271 358 PANTHER O-METHYLTRANSFERASE 16 343 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01271 Lapu-Chr1 25514965 25517430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01271 31 356 Monolignol Biosynthesis Gene Families AT5G54160 29.940 2.63e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01271 K22588 K13262 gmx:100811609 537.724