Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01270 TTGGACAATTCACCCCGTGATGCCTCCGAATCTCGCTCTTTGGTACCCCACTTGGAATCATCAGATTCTCTTGCCTCAGTTATCTCCTTGCAGATAACGTTGTTTCCAAGCAAGGGCTTTTCAATAGGCATCAGCTCTCACCATGCTGTTCTTGACGGAAAATCGTCAACCATGTTTATCAAGGCTTGGGCTTATGCATGTAAATCATTTGAAGAAGAATCTCCAATATCTTTGAAGCCGGAGTTACAGCCTTTATTTGATAGAGATCTCATCAAAGATCCAACTGGTCTTGAAACTGTGTTCATCAATACCTGGACGCAAATCGCATCTCGAATGGACCCTTCTGATACAAGCAACGGGCGAAGCTTAAAGATTATGTCACTACCAACCGAGGAAAACCTAGTTCGAGCCACGTTCGATCTAAAACGAGGAGATTTGGAGAAGATAAAGAAAAGTGTGTTATCGAAGTGGGAGTTAGGCTCGGTTAGAACCTCCAATCCCTGA 504 0.4385 LDNSPRDASESRSLVPHLESSDSLASVISLQITLFPSKGFSIGISSHHAVLDGKSSTMFIKAWAYACKSFEEESPISLKPELQPLFDRDLIKDPTGLETVFINTWTQIASRMDPSDTSNGRSLKIMSLPTEENLVRATFDLKRGDLEKIKKSVLSKWELGSVRTSNP* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01270 167 PANTHER - 3 156 - -
Lapu1g01270 167 Gene3D - 1 118 IPR023213 -
Lapu1g01270 167 Pfam Transferase family 7 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01270 Lapu-Chr1 25510517 25511496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01270 12 150 Monolignol Biosynthesis Gene Families AT5G48930 26.207 1.14e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01270 - - gmx:100813762 256.529