Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01268 ATGAAAGTGATACAGGTATTCAACGTAGCTCCAACTTCAGAATCAAAACAGTTACAAACTCAAACAACGCTTCCCCTTACCTTCTTCGACCTATTATGGCTAAGGTTACCTCCTGTTCAACGCCTCTTCTTCTATGAATTTCATCATCCAACTCATCTCTTTTTTGATACCCTTCTTCCCAAACTCAAATACTCTCTTTCTCTTGCACTCTCTCACTTTTTCCCTCTTGCTGGACATCTCACTTGGCCCCTTCACTCCCAAAACCCCATCATCAGCTACAAAACAGGTGACACTGTTTCCCTAACCGTAGCCGAATCTGACGCTGATTTCAACCAACTAGCTGGCACGGGTCTTTCTGAGGCCAGAGAAATCCACCAACTTCTACCCCAATTGACCATATCCCATGATCAAGCAAATGTTTTAGCCTTGCAAGTCACTCTATTTCCAAACTCTGGATTTTCCATAGGAATAACCACACACCATGCTATTCTGGATGGAAAGACTTCAACAACGTTTATCAAATCCTGGGCTTATCTTTGTAGAGATCAACCACAATCACCCTTTTCTCTGCCACCTGAACTTTCTCCATTTTATGACAGGGCAGTAGTCCGGGACCCCAATCATTTAGAACAAAAATATCTCAGTGATTGGTTAAAACAGGATGGACCCAACAACAGAAGCCTCGTAGTTTGGGATCTGCAAGTCCCAGAAGATGCAACTAGAGGCGTGTTTCATCTCTCACGTTCAGGTATTGAAAAGCTGAAGCAGATTGTGTTGTCCAAGAAGAAAGGGAGCGACAGCAACCTTCGCTTGTCAACGTTTGTGTTATCCGTTGGTTATGCTTGGGTTTGTAGGGTGAAAGCAGAGGAAACAAAAAACAAAATGGTTATGTTAGCTTTGAACGTTGACTGCAGGGCGCGTTTGGAGCCACCAGTTCCCGCAACGTATTTTGGGAACTGTGTTGGGGCAAGGCTTGCAATTGCTGAGACAAGCGAGATATTAGGGGAGGATGGACTAATTGTGGCAGTGGATGCAGTGAATGAGGGTTTGGAAACTCTGAAGGAGGGAGCGCTGAGTGGGGCAGAAAATTGGTCAACGTGGTTGCTTGAAGGTTTCAAAGTTGATGTGAGGATCGTTGGCGTTGCTGGGTCACCAAGGTTTGATGCTTATGGTAATGACTTTGGTTGGGGAAGACCAAAGAAGGTTGAGATGGCTTCTATAGACAGAACTGGGGCATTTTGTTTATCAGATAGCAGAAGTGGTGACGGGGTTGAGATAGGTTTTGTGTCCAACAAAGATGCAATGCAGACCTTTGCGTCTCTCTTTCTCAATGGCCTTCAATCTTGA 1347 0.4477 MKVIQVFNVAPTSESKQLQTQTTLPLTFFDLLWLRLPPVQRLFFYEFHHPTHLFFDTLLPKLKYSLSLALSHFFPLAGHLTWPLHSQNPIISYKTGDTVSLTVAESDADFNQLAGTGLSEAREIHQLLPQLTISHDQANVLALQVTLFPNSGFSIGITTHHAILDGKTSTTFIKSWAYLCRDQPQSPFSLPPELSPFYDRAVVRDPNHLEQKYLSDWLKQDGPNNRSLVVWDLQVPEDATRGVFHLSRSGIEKLKQIVLSKKKGSDSNLRLSTFVLSVGYAWVCRVKAEETKNKMVMLALNVDCRARLEPPVPATYFGNCVGARLAIAETSEILGEDGLIVAVDAVNEGLETLKEGALSGAENWSTWLLEGFKVDVRIVGVAGSPRFDAYGNDFGWGRPKKVEMASIDRTGAFCLSDSRSGDGVEIGFVSNKDAMQTFASLFLNGLQS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01268 448 Pfam Transferase family 16 440 - -
Lapu1g01268 448 SUPERFAMILY CoA-dependent acyltransferases 96 201 - -
Lapu1g01268 448 SUPERFAMILY CoA-dependent acyltransferases 272 448 - -
Lapu1g01268 448 Gene3D - 235 448 IPR023213 -
Lapu1g01268 448 PANTHER - 2 447 - -
Lapu1g01268 448 Gene3D - 1 229 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01268 Lapu-Chr1 25487804 25489452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01268 47 443 Monolignol Biosynthesis Gene Families AT5G48930 25.542 4.99e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01268 - - gmx:102660160 707.983