Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01266 ATGAAAGTGGTAGAAGTTTTGAGTGTAGCACCAAGCTTTGAATCGCAAGAGGTACCAACTGAAACATCTTTTCCCCTCACCTTCTTCGACATATTATGGTTAAGGTTACCTCCTGTTCAACGCGTCTTCTTCTATGAGTTTCATCATCCAACTCAACTCTTTTTCGATACCCTTCTTCCCAAACTCAAGCACTCTCTCTCTCTTGCACTTGCCCACTTTTTCCCTCTTGCTGGACACCTCACTTGGCCCACCCACGCCACCAAACCCCTCATCATTTACAACCCAGGTGATACTCTTTCACTCACTGTAGCTGAATCTGACGCTGATTTCAACCATCTAGCAGGCACAGATCTCTCTGAAGCTAAAGAAACTCACCATCTTGTACCTCCCTTGACCATATCCCACGAACAGACTACGCTTTTTGCCTTGCAAGTCACTCTCTTTCCAAACTCTGGATTTTCCATTGGAATAACCTCCCACCATGCTGTTCTTGATGGCAAAGCTTCAACCACATTCGTCAAATCCTGGGCATATCTTTGTAGGGAATCACAACCTCCCCTTTCTTTGCCACCTGAATGGAGTCCTTTTTTTGACAGGGACATAGTGACAGACCCCAAGAAAATAGGAGAAAATTTTTCCCGTGGTTGGTTAAAGGTAGGTGGACCCAACAACCGAAGTCTCATGGTTAATGATATGAAAGTTGCAGAAGATGCAACTAGAGGCTTGTTTCAATTGTCTCGCTCAGATATTGAAAAGCTGAGGCAGATTGTGGAGAGGAAAGAGAATAACACCGACCTTCACTTATCAACCTTTGTGTTAGCTGCCGCCTATGCGATGGTTTGCAGAGTGAAAGCAGAAGAAGTCCAAAGTCAAAGAACTGGTTTCGGTCTGAATGTTGATTGCAGGCGTCAGTTGGAGCCGCCTGTTCCTCCAACATATTTAGGGAACTGTGTTGGTATCGCTATTGCAATTACTGAAACAAGAGAATTGTTGGGGGAGGATGGACTTATTGCGGCTGTGAAAGCACTGAGTGAAACTTTGGGAACATTGAAGAAGGATGGTTTTCTGAAGGAAGCAGAAAACTGGTGGACAATGGTGTATGAAAGTTTCACCGGTGGTGACACAATGACTGCTGCCTTTGCAGGGTCACCGAGGTTTGACGTTTACAGTAGTGACTTTGGTTGGGGAAAACCAACGAAGGTGGAGATGGTGTCTATTGACAGAACTGGAGCGTTTTGCCTTTCAGATAGCAGAACTGGTGATGGAATTGAGATAGGTTTTGTGTCCAAGAAAAAAGCTATGGAGGCCTTTGCTTTTATCTTTGTGAATGACCTTCAATCTTGA 1344 0.4464 MKVVEVLSVAPSFESQEVPTETSFPLTFFDILWLRLPPVQRVFFYEFHHPTQLFFDTLLPKLKHSLSLALAHFFPLAGHLTWPTHATKPLIIYNPGDTLSLTVAESDADFNHLAGTDLSEAKETHHLVPPLTISHEQTTLFALQVTLFPNSGFSIGITSHHAVLDGKASTTFVKSWAYLCRESQPPLSLPPEWSPFFDRDIVTDPKKIGENFSRGWLKVGGPNNRSLMVNDMKVAEDATRGLFQLSRSDIEKLRQIVERKENNTDLHLSTFVLAAAYAMVCRVKAEEVQSQRTGFGLNVDCRRQLEPPVPPTYLGNCVGIAIAITETRELLGEDGLIAAVKALSETLGTLKKDGFLKEAENWWTMVYESFTGGDTMTAAFAGSPRFDVYSSDFGWGKPTKVEMVSIDRTGAFCLSDSRTGDGIEIGFVSKKKAMEAFAFIFVNDLQS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01266 447 Pfam Transferase family 14 437 - -
Lapu1g01266 447 SUPERFAMILY CoA-dependent acyltransferases 237 446 - -
Lapu1g01266 447 PANTHER - 2 446 - -
Lapu1g01266 447 Gene3D - 1 227 IPR023213 -
Lapu1g01266 447 Gene3D - 235 447 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01266 Lapu-Chr1 25475596 25476966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01266 47 441 Monolignol Biosynthesis Gene Families AT5G48930 24.878 2.11e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01266 - - gmx:100805184 645.966