Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01265 ATGAGTGTGGTACAAGTTTTCAGTGTAGCACCAACTTTGGAATCAGAAGAATTACCAACTCATACATCGCTTCCCCTCACCTTCTTTGACATACTATGGTTAAGGTCACCTCCTATTCAACGCATCCTCTTCTACCAATTCTCTCATCAAATCCCACCCTTCTTCCGCACCCTTGTTCCCAAACTCATACACTCTCTTTCTCTTGCACTTGGCCACTTTTTTCCTCTTGCAGGCCACCTCATTTGGCCCCTTCACTCCCAAAACCCTATCATCAATTACCAAACCGGTGACACCGTTTCTCTCACAGTAGCAGAATCTGATGCTGATTTCAAGCATCTAGCTGGCTCAGATCTTTGGGAAACTGAAAAAATGCATCATATTTTACCTCACTTGACCATATCCCATGAAAAAACTACGCTTCTAGCCTTGCAAGTCACTCTATTTCCAAACTCTGGATTTTCCATTGGAATAACCTCACACCGCGCTGTAATGGATGGCAACACTTCAACATCTTTCATCAAAGCCTGGGCTTATCTTTGTAGAAAATCACAATCACCCTCTTGTTTGCCACCTGAACTATGTCCTTTCTATGAAAGGATATTAGTAAAAGACCCCAACCAAGTAGGGGGAAAACTCGTCAAAGATTGGTTAATGCAGGGGGGACGCAGCAACAGAAGCCTCATGGTTTGGGATGTGCAATCTCCAGAACATGCAACCGGAGGCTTATTTCAATTGTCTGGTTCAGATATTGAAAAGCTGAAGCATTCTGTTGTGTCTAAGCAGACACGGAGCAACACCAACCTTCACTTGTCAAAGTTTGTGTTGTCTCTTGCCTATGCATGGATTTGCAGGGTGAGAGCCGAGGAAATGGAAAACGAGAGAGTTATGTTGATTCTTACTGTGGATTGCAGGGGTTGTTTGGAGCCACCTCTTCCTCCGACCTATTTTGGGAACTGTGTTGGGTTAAGGCTAGCAATTGCTGAAAAAGGAGAATTATTGGGGGAGGATGGACTAACTGTGGCCGTGGAAGCACTAAGTGAAGCTTTGGAAACTGTAAAGAAGGATGGTGTTCTGAATGGAGCTGAAAATTGGTCATCATGGTTGCTTGATTGTGTGGGAGGTGAAACTGATGTGAAGGCGATTGGAGTTGCAGGGTCACCGAATTTTGAGGCTTATAGTAGTGACTTTGGTTGGGGAGGACCAAAGAAGGTGGAGACATTGTGTATTGAAAGAACTGCAGTGTTTAGTCTTTCAGATGGCAACAATGGAGAAGGAATTGAGATAGGCTTTGTGTCCAAGAAAACAACAATGGAGACTTTTGCTTCTCTCTTTGCTAAAGGCCTTCAATCTTGA 1353 0.4398 MSVVQVFSVAPTLESEELPTHTSLPLTFFDILWLRSPPIQRILFYQFSHQIPPFFRTLVPKLIHSLSLALGHFFPLAGHLIWPLHSQNPIINYQTGDTVSLTVAESDADFKHLAGSDLWETEKMHHILPHLTISHEKTTLLALQVTLFPNSGFSIGITSHRAVMDGNTSTSFIKAWAYLCRKSQSPSCLPPELCPFYERILVKDPNQVGGKLVKDWLMQGGRSNRSLMVWDVQSPEHATGGLFQLSGSDIEKLKHSVVSKQTRSNTNLHLSKFVLSLAYAWICRVRAEEMENERVMLILTVDCRGCLEPPLPPTYFGNCVGLRLAIAEKGELLGEDGLTVAVEALSEALETVKKDGVLNGAENWSSWLLDCVGGETDVKAIGVAGSPNFEAYSSDFGWGGPKKVETLCIERTAVFSLSDGNNGEGIEIGFVSKKTTMETFASLFAKGLQS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01265 450 Pfam Transferase family 15 442 - -
Lapu1g01265 450 Gene3D - 1 227 IPR023213 -
Lapu1g01265 450 Gene3D - 234 450 IPR023213 -
Lapu1g01265 450 PANTHER - 3 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01265 Lapu-Chr1 25472811 25474163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01265 54 401 Monolignol Biosynthesis Gene Families AT5G48930 25.205 1.48e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01265 - - vun:114186114 786.563