Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01264 ATGGTACCGTGGAACAGGATTTTAACAAGCATAAAGTGGAAGGACAAAACTCTGCACCTAGCTACCAACAATGAGATACATAAGATCATGATTAAGAGCCCAAAAGAAGTGGATTTTCCTTTAAAACAGGAGGGTAGTCATTCTCAATCAATTAGTGATCCTGAAAAAGCAAAGGCTTCGTCAAGCTCAGCAGCACAATGGCCAAGATTGAAGGATCCAAGGATTGTTCGAGTATCTAGAGCCTTTGGAGGAAAAGACAGGCATAGCAAGGTTTGCACAATAAGAGGGTTAAGAGACAGACGGGTGAGACTATCAGTTCCAACTGCTATCCAACTCTATGATCTTCAAGATAGGCTAGGGCTCAGTCAACCAAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCTAAGCATGAAATTGATGAACTTCCACCACTGCCAATTATTCCTTCAGTGAATAACTTCACCCTTGCTTATCCATCTGCTGTTACTTCTACTGAAGCCACAACCTCTCACTCTCAGCCTAATGAAAACCTTCTTAATATAAATAGTAGCATTCAGTGGCAAGGTTCAAACCAAAATTCTGCATGGAAGTTAAAGCGTAAAGAAGTTTCAGGAGAAATGATCAGCACTGACAAACCAAATTGGATAAATAGAAGTGAAGAGGATAAGCAAGGAAGCACTAATGAAGGTCCTAGCACACATGTACCAAATAATCTCTTACAAAGGGTAAACCATCCTTCATTCTTGGGCCTGATAAATACTATGCCACATGGTTACCAGTGGGAACCTTCTGCTGGTGATGTTTCTCATCAGTTGGCAAACAATGGATTTTCAAACCAAACAGATATACACAGCATTAACGTTGTACCTTTCCCAACATCAACATGGTCTTTATCAACAGGAAATTCTCAAATTCTGCTATGTCCTCCAGGAGCAGCACAGCCATATTTCCCTTCACATTTTACGGCAATGGACATGGATCAGAGGCAAATCAACCACTATCAGATGTTGAGTTCAGGTTCTCAAAACCCATTGGCAAATTCTCTCAATCATTCTTTTAGCTTGGCTATGATGTCTAATAAACCTCTCCATTCACCCAACAGCAGCAAAAGCCCATCCCACAAAGACCAAGATTTCCCTTCCAAGTGA 1149 0.4117 MVPWNRILTSIKWKDKTLHLATNNEIHKIMIKSPKEVDFPLKQEGSHSQSISDPEKAKASSSSAAQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIIPSVNNFTLAYPSAVTSTEATTSHSQPNENLLNINSSIQWQGSNQNSAWKLKRKEVSGEMISTDKPNWINRSEEDKQGSTNEGPSTHVPNNLLQRVNHPSFLGLINTMPHGYQWEPSAGDVSHQLANNGFSNQTDIHSINVVPFPTSTWSLSTGNSQILLCPPGAAQPYFPSHFTAMDMDQRQINHYQMLSSGSQNPLANSLNHSFSLAMMSNKPLHSPNSSKSPSHKDQDFPSK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01264 382 MobiDBLite consensus disorder prediction 358 382 - -
Lapu1g01264 382 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 44 337 IPR005333 GO:0003700
Lapu1g01264 382 ProSiteProfiles TCP domain profile. 84 142 IPR017887 -
Lapu1g01264 382 MobiDBLite consensus disorder prediction 43 67 - -
Lapu1g01264 382 MobiDBLite consensus disorder prediction 41 68 - -
Lapu1g01264 382 MobiDBLite consensus disorder prediction 358 374 - -
Lapu1g01264 382 MobiDBLite consensus disorder prediction 209 239 - -
Lapu1g01264 382 Pfam TCP family transcription factor 84 206 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01264 Lapu-Chr1 25460007 25464984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01264 67 156 TCP Transcription Factor Family AT3G02150 82.222 1.89e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu1g01264 TCP 6.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01264 - - var:108327895 684.1