Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01262 ATGTCTGGAAAAGCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTCAGCTCTTTGACCGCCATCGTTTCCTCACAGGCCAACGCTCTGGCACCTACATCCAGCACAGGCCTACTTCAGGTGAAAGCAGTTATGAAATTAAAGAGCTTGATGGTACAATGCAGAAAACTAAGGCAAGGAATCTGAAGAGTGCTAGAGAAAAGCAACAATTCTCGACTGAATCATCCATAACTTCTTTGTCTTCATCCTCTTGTTCATCTAGCATGTCATCCCTTGAGTTTAACAGAACGATTCAAATGCAATCATCGTCAAGAAATCAAACAAGAATTCCTGAAAACACAAATTCAAAAGTAGCAAAGAAGAAACTTGATACCCCGCGCCAACAATTCCTCCATTTCCATCATATTGTCAAAGACTCAATGCATAAAGAAACTCAAGGATTGTCTGTGAAAACTGTGGTTGAAGAGGAAAAGAAGGGTCAGACTAATAATACCTTGAAACTCATAGACTCTCCCCGGCCTTTGCGTTCACACAAATCTGTCAATGCAGGAGTTACAGTTGCCAGCGAACCATTCCATACTCTTGCCAAATCCAAGAAAACACCTTGGGACTCACCACGGCTCTCTTATGATGAAACATTCAAATCTGCCACAAGGCATAAGGAATTCCCGAGGCTTTCCTTGGACAGCAGAGAAGGGTCCAAAAGAGGTTCCAATGAAGGAAATAAGTCTCGCAACCTGTTGAAGGGTCAACAGAAAGGTTATACAAAGAACTCTAGCACAATGATTAACCAGCTGCAAGAACCAGAGACTTCCAGAAGATCTTCTAGTGTTGTAGCAAAGTTGATGGGACTTGAAGCCCTCCCAGAGTGTACACAAACTTGTGGGAGTCCAATTGGAACTTCTAGTCGCTCTACCAAAAAGAATGAGGTCTTGGCAAGATCTAGCACAAGTGTTGAAGATAGGCACCACCAAAAACTCACCTCGCCTCAGTTTAGAAAGGCTGATTCAATCACAAATGAGAAGCCATATTCACGATTTGCACTAGAATCAACTCCTTGGAGGCAACCTGATGAAATCCAAAGTTCTTCCAATGGTTGTGAATCTGATATAAGAGCCTCAAAGACCTCTCTCACGGTATATGGGGAAATTGAGAAAAGGGTGGCAGAACTTGAGTTCAAGAAGTCTGGAAAGGATCTCAGAGCCCTTAAACATATTCTTGAAGCAATGCAAAGGCGTAAAGATTCTTTAGACATTGCAAGAGATCGGGCTTCAAATTCTCCATCTGACGATAGGAATAGTACTAATTCCAATGAAAGCTCGAACTTACAAAGCCCACGAGTACGACAAAAAGACCTGGCATCTGTCACGGATGAGATGTCAAATTCTAACCGGGGTAGTAAATTGCCAATTGTCATCATGAAACCTGCTAAAGCGACTAGAAAAGTCAATAGTCCTTCTCCTACAGAATTATCAGTTCATGGTAAATCTGGTCTCAGCAAGTGTTCCCCTGGTAATCCAACAAATGGAAGATTGGTTGACAGGCATAGTGCTAAAGGCATAAGTTCAGCAAAACATATCAACGATCCTTTTGGCCAAGAGGTTCGTCCATCATATAAAAACATGAGAACCTCAAAATTGATGTCCTTGAAAGTTTCTGAAGACAGCACTGGAGAATGCACCACCAATTCTGGTTACATAACTGTGATAGGGAGCCCCAGATTACAAAAGAAGTCTGGTCAGGAGAGGTGTTCACAAGCAACCAGTCCATCATCAGGTTCCTGCATTAACAGAAGAGAGAACAATCCGCAGACTGTGGAATTGTCTTCTTCAAGTACAACACCAAGACATAAGTTCTCCAGTTTGCAGCAAATAAATGAACGTTTCAGTGAGATCAGCAGTAACTGGAGGGATTTTAAGCACCATGTTAATGTCATTTCGGACTTTGACGACAAAAGCAGCTCGGCCAGTCATAGTGAGATTGAAGTCATTCGAATTGATCAAACTGGAAAGATCATTAGCTCCTCCATCCAGCTGAGTTGCATGAATCAAAATAATGCATTCGAAGAGTTGAGGAAAGCAGAGACAATGGTTACTGCAGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTGCATTTTATAGAGATGACCCACCATCTCCAGTGAAAAAGAAACCACACATCTCAAAATATTTAGGTGAAGCTCAAAGCACCGACGATGATAGCGAAGAGAACCCAGTGGATATACTTCAAGAAATTGACTGGATTGAAGAGAAATTCATCAATTTCAATAACACTAAGCATCCTAATCATAAGTATATAACAGAAATACTGTTAGCATCAGGTCTGCTGAGTGGCCGCAGCTCTAGCCAGATATTTCATTCTCCGGGTCACTTGATTAATCCAAAGTTGTTCTTTGCACTTGAACGAGTGAAGACAAAACAGAGACATTTTAACATTGAAGACAGTGCCAAGAAGATTGCCAGGATTGAAAATCCAGAGCAGATGCAAAGAAAACTCATATTTGATGTTGTCAATGACATTTTAGTTCAAAAGCTGATATTGCAGAGTTCTTCTGCATTGTGGTGCCAACCAAATGAGTTAGCAGGCACAACACCAAAAGGGCAGCAGCTTTTGGATGAGCTGTGCACAGAAATAGATCAGTTGCAACCTCAAAATGGGAATGTCAGTTTAGCTCATCACGAGGATGACAATTTGAAGCATCACCATGCAATTTGGACTAACTGCTGCACTGAAATACCAAATGTTGTGTTGGATATTGAACGTTTGGTCTTTAAAGATTTGATAACCGAGGTTGTGAGGGGAGAAGTAGCAAGCCATCCTGGTACACATTGCAGGCAACTAGTGTTTTCAAGT 2910 0.4158 MSGKALKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSGTYIQHRPTSGESSYEIKELDGTMQKTKARNLKSAREKQQFSTESSITSLSSSSCSSSMSSLEFNRTIQMQSSSRNQTRIPENTNSKVAKKKLDTPRQQFLHFHHIVKDSMHKETQGLSVKTVVEEEKKGQTNNTLKLIDSPRPLRSHKSVNAGVTVASEPFHTLAKSKKTPWDSPRLSYDETFKSATRHKEFPRLSLDSREGSKRGSNEGNKSRNLLKGQQKGYTKNSSTMINQLQEPETSRRSSSVVAKLMGLEALPECTQTCGSPIGTSSRSTKKNEVLARSSTSVEDRHHQKLTSPQFRKADSITNEKPYSRFALESTPWRQPDEIQSSSNGCESDIRASKTSLTVYGEIEKRVAELEFKKSGKDLRALKHILEAMQRRKDSLDIARDRASNSPSDDRNSTNSNESSNLQSPRVRQKDLASVTDEMSNSNRGSKLPIVIMKPAKATRKVNSPSPTELSVHGKSGLSKCSPGNPTNGRLVDRHSAKGISSAKHINDPFGQEVRPSYKNMRTSKLMSLKVSEDSTGECTTNSGYITVIGSPRLQKKSGQERCSQATSPSSGSCINRRENNPQTVELSSSSTTPRHKFSSLQQINERFSEISSNWRDFKHHVNVISDFDDKSSSASHSEIEVIRIDQTGKIISSSIQLSCMNQNNAFEELRKAETMVTAEQPSPVSVLDAAFYRDDPPSPVKKKPHISKYLGEAQSTDDDSEENPVDILQEIDWIEEKFINFNNTKHPNHKYITEILLASGLLSGRSSSQIFHSPGHLINPKLFFALERVKTKQRHFNIEDSAKKIARIENPEQMQRKLIFDVVNDILVQKLILQSSSALWCQPNELAGTTPKGQQLLDELCTEIDQLQPQNGNVSLAHHEDDNLKHHHAIWTNCCTEIPNVVLDIERLVFKDLITEVVRGEVASHPGTHCRQLVFSS 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01262 970 MobiDBLite consensus disorder prediction 589 628 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 440 479 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 306 324 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 232 289 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 232 250 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 306 341 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 493 518 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 62 78 - -
Lapu1g01262 970 Pfam Domain of unknown function (DUF4378) 782 949 IPR025486 -
Lapu1g01262 970 Coils Coil 418 438 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 79 95 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 325 341 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 428 520 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 251 289 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 62 95 - -
Lapu1g01262 970 PANTHER LONGIFOLIA PROTEIN 3 966 IPR033334 GO:0051513
Lapu1g01262 970 MobiDBLite consensus disorder prediction 366 380 - -
Lapu1g01262 970 MobiDBLite consensus disorder prediction 357 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01262 Lapu-Chr1 25442109 25447258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01262 142 956 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.610 1.25e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01262 - - vun:114182931 1593.17