Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01260 ATGGGTAACATCTGCGCTCGTTTGAAGGCGAAGCCCGCGCCGCCGCCCTCCTCCTCCTCCTCCTCCTCTAAGAAGCGCTCCTCTTCCCGCAGAGAGAGGAAGCTCAACGACGCCGCGATTCGCGAGCAGGCCATCGCCGCCGCGATTCTCTTCAAGCAGCATCAGCAGCAGCAGCAGAACTTCGATCGCTCCACTTCGCTTAGGTACCCGAATGGAGTCTCCAAGAAGAGCAACAGCAGCAGCAACACCTTGCCGAGGAGTTCGAGCTCCAGGGCCAGGTCCCTCACCGACCCTCTCCTTCAACCTCACCAGCTTCTCAATCAGGATGTGAAAGTTGATGATCTTGAGACAAATCGTATTGTCCTTGTTCATGGAGGTGGCTTCGGGGCCTGGTGTTGGTATAAATCTATTGCACTTCTAGAAGAAAGTGGTTATAAAGTGGCTGCAATAGATTTAACTGGTTCTGGAGTGAGTTCATTTGATACAAACAGCATTATAAGTTTGTCACAATATGTGAAGCCACTCACTGACTTCCTTGAAAAACTTGCAGAAGGCGAAAAGGTGATTTTGGTTGGGCATGATTTTGGAGGGGCATGTATATCATATGCAATGGAGATGTTTCCTCTTAAAATTTCCAAAGCTGTGTTTATTGCTGCAGCAATGCTGACGAGTGGACAAAGCACTCTCGATATTATTTCTCAACAGGCAGGGTCTGATGATCTTATGCAACAGGCTCAGAATTTTATATATGCTAATGGGAATGATCTTCCTCCTACTTCTTTTGATCTGGACAAGTCATTGTTGAAGGATTTGTTATTCAACCAAAGTCCCTCCAAAGATGTTGCATTAGCATCTGTCTCCATGAGGTCTGTACCATTTGCACCAGTTTTGGAGAAGCTTTCCCTTTCAGACCTGAAGTATGGATCTGTAAGGCGGTTTTATATACAAACTCTTGAAGACAATGCCATACCCCTTTCACTCCAGGAAAACATGATAAATGCAAACCCCCCAGAAAAGGTTTTCCGTTTGAAGGGAGCTGATCATTCTCCTTTTTTCTCAAAGCCTCAAGCTCTGCATAAGTTATTGGTAGAAATCTCAAAGATCCTCTGA 1110 0.4613 MGNICARLKAKPAPPPSSSSSSSKKRSSSRRERKLNDAAIREQAIAAAILFKQHQQQQQNFDRSTSLRYPNGVSKKSNSSSNTLPRSSSSRARSLTDPLLQPHQLLNQDVKVDDLETNRIVLVHGGGFGAWCWYKSIALLEESGYKVAAIDLTGSGVSSFDTNSIISLSQYVKPLTDFLEKLAEGEKVILVGHDFGGACISYAMEMFPLKISKAVFIAAAMLTSGQSTLDIISQQAGSDDLMQQAQNFIYANGNDLPPTSFDLDKSLLKDLLFNQSPSKDVALASVSMRSVPFAPVLEKLSLSDLKYGSVRRFYIQTLEDNAIPLSLQENMINANPPEKVFRLKGADHSPFFSKPQALHKLLVEISKIL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01260 369 MobiDBLite consensus disorder prediction 60 98 - -
Lapu1g01260 369 FunFam putative methylesterase 11, chloroplastic 114 368 - -
Lapu1g01260 369 Pfam Alpha/beta hydrolase family 120 358 IPR000073 -
Lapu1g01260 369 SUPERFAMILY alpha/beta-Hydrolases 120 364 IPR029058 -
Lapu1g01260 369 Gene3D alpha/beta hydrolase 111 367 IPR029058 -
Lapu1g01260 369 PRINTS Epoxide hydrolase signature 124 142 IPR000639 GO:0003824
Lapu1g01260 369 PRINTS Epoxide hydrolase signature 343 365 IPR000639 GO:0003824
Lapu1g01260 369 PRINTS Epoxide hydrolase signature 144 159 IPR000639 GO:0003824
Lapu1g01260 369 PRINTS Epoxide hydrolase signature 190 203 IPR000639 GO:0003824
Lapu1g01260 369 PANTHER METHYLESTERASE FAMILY MEMBER 118 366 IPR045889 -
Lapu1g01260 369 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01260 Lapu-Chr1 25412380 25417735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01260 32 191 Miscellaneous Gene Families AT3G29770 63.190 1.66e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01260 - - gmx:100818550 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01260 1 25412380 25417735 Lapu1g01260 1 25412380 25417735 ECH