Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01257 ATGACAACAACCTTCAACATCATGGAAGAACTTTGCCACCATTTTTCACTTGCAGAGATACAGTCATCACTAACGAATGTTAACGAATCTTTGGTGATTGGAGAAGATTCATTCGGGGTAGTGTACAAGGGTTATCTCAACAAAGGTGATATCACTGTTGCAATAAAGTGGTTCAACAAGGGTTCTCTTTCTGGTCTCTCAGAATCACAGCTGAAGAGCGAGGTTCTCTTCCTTTGTCAACTCCACCACCCCAACATCATGCCTTTAATTGGATTTTGCATTGAAAGAAACCCCCATCTGATTCTTGTACATGAATACATGTTTAACGGTTCCCTCAGTGATCACCTTCATCATAGAAACAATCACAAAGTTGTTCCACTTTCGTGGAAGAGGAGGCTTCAAATTTGCATAGGTGTGGCACGTGGATTGCACTATCTACACACAGGAGGCAGGTGTTCTGTGATACACAATTTTTTCAAAACACAACACATCCTTTTGGATCAAAACTGGGAGCCTGAAATTTCTGGTTTATTGTTGTCCAAAAGGGGAGCTGTTGACGTTGCAAGGTCATCTCTTGTTGTGAGAAACCATGATACTTTCGCATATTGTGATCCTGAGTATGCAGCCTCTGGCATCTTGACTGTGAAATCAAATGTGTTTTCATTTGGTGTGGTTCTATTGGAAGTTGTGAGTGCAAAGCAAGCGCGAGATTTGTACTTGGAACGTGTGAATAAACCGAATTATTCAGTGCAGTCACATGCAGAAAAAATAGTTGATCCGTTTCTTAAATCCAAAATTGCTCCAGATTCTTGGAAAACGTTCATTGATATTACTGAGAGGTGCTTGCATAAACAAGGAACGGAACGACCAAACATGGGTGAAGTGGAGAAGAAACTTGAGCTTGCGCTTCTATTGCAGGAGAAAGCAGAAACCTAG 936 0.4124 MTTTFNIMEELCHHFSLAEIQSSLTNVNESLVIGEDSFGVVYKGYLNKGDITVAIKWFNKGSLSGLSESQLKSEVLFLCQLHHPNIMPLIGFCIERNPHLILVHEYMFNGSLSDHLHHRNNHKVVPLSWKRRLQICIGVARGLHYLHTGGRCSVIHNFFKTQHILLDQNWEPEISGLLLSKRGAVDVARSSLVVRNHDTFAYCDPEYAASGILTVKSNVFSFGVVLLEVVSAKQARDLYLERVNKPNYSVQSHAEKIVDPFLKSKIAPDSWKTFIDITERCLHKQGTERPNMGEVEKKLELALLLQEKAET* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01257 311 Gene3D Transferase(Phosphotransferase) domain 1 108 306 - -
Lapu1g01257 311 SUPERFAMILY Protein kinase-like (PK-like) 8 304 IPR011009 -
Lapu1g01257 311 ProSiteProfiles Protein kinase domain profile. 27 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01257 311 Pfam Protein tyrosine and serine/threonine kinase 32 299 IPR001245 GO:0004672|GO:0006468
Lapu1g01257 311 PIRSF ILK 13 309 - -
Lapu1g01257 311 Gene3D Phosphorylase Kinase; domain 1 12 106 - -
Lapu1g01257 311 PANTHER OS07G0166700 PROTEIN 12 306 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01257 Lapu-Chr1 25396740 25397675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01257 11 310 Receptor kinase-like Gene Family AT3G51550 44.625 1.45e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01257 PK_Tyr_Ser-Thr 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01257 - - pvu:PHAVU_008G031100g 549.666