Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01255 ATGGATCGTGGAACCCTCCGTGACCATCTCTACGGAACCGATAACCCTCCGCTCTCATGGAATCAAAGGCTTCAGATATGCATAGGGGCCGCACGAGGACTGCATTATCTGCATACAGGTGCGAAACGGATGATCATTCACCGTGACGTCAAGAGCACAAACATCTTGTTGGATGAAAAATGGGTGGCCAAAGTATCAGACTTCGGGTTATCTCGAATCGGGCCCACGGGTTCTTCAATAACCCATGTGAGCACTCAGGTGAAAGGCAGTGTAGGGTATTTAGACCCGGAGTACTACAAACGACAGCGTTTGACGGAGAAGTCGGACGTGTACTCGTATGGGGTGGTGCTGTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTCAGAATGGTGGAGAAGCAACAGGTATCACTGGTGGATTGGGCGAAGCATCGGTATGAGAAGGGGTCTCTGGGTGAGATTGTGGATCCAGCACTGAAGGGGCAGATAGCACCTCACTGTTTGCGCAAATTTGGTGAGATAGCTCTGAGCTGTTTGCTTGAGGATGGGACTCAGCGACCTTCCATGAACGACGTGGTTGGGGTGTTGGAGTTTGTTCTGCGGCTGCAGCTTCAGGATGGTGCTCATGTGAATGCTGTGTTGGAAAGTGGTGGGGATTATGAAGACAGTACTACTGAGGACATGTTTAGCAGTACCAATAGTGGTGTGCATGTTTCGGACTATAGTAACAGCAGTGGATTGAACACTACAAGCTACGGGAGTAAGGAATCTGACAGGTTGATCTCAAAGTTTGTTTTCTCTGAGATTAAGGATCCAAAGGGACGATGA 828 0.4964 MDRGTLRDHLYGTDNPPLSWNQRLQICIGAARGLHYLHTGAKRMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSITHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMVEKQQVSLVDWAKHRYEKGSLGEIVDPALKGQIAPHCLRKFGEIALSCLLEDGTQRPSMNDVVGVLEFVLRLQLQDGAHVNAVLESGGDYEDSTTEDMFSSTNSGVHVSDYSNSSGLNTTSYGSKESDRLISKFVFSEIKDPKGR* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01255 275 PANTHER OS07G0166700 PROTEIN 1 203 IPR045272 GO:0004714|GO:0006468
Lapu1g01255 275 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01255 275 SUPERFAMILY Protein kinase-like (PK-like) 1 199 IPR011009 -
Lapu1g01255 275 Pfam Protein tyrosine and serine/threonine kinase 1 194 IPR001245 GO:0004672|GO:0006468
Lapu1g01255 275 FunFam Receptor-like protein kinase FERONIA 1 216 - -
Lapu1g01255 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Lapu1g01255 275 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
Lapu1g01255 275 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01255 Lapu-Chr1 25381943 25382770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01255 1 275 Receptor kinase-like Gene Family AT3G51550 57.292 6.90e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01255 PK_Tyr_Ser-Thr 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01255 - - vun:114186088 512.301