Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01254 ATGGTGTTCGAGTTGAGCTCTCTTTGTTGCTTTGATCAGAGATTATCCATGGACACAACTTGCCCACCAACTGCTTTATCAGGAACCATCCTCCTCCTCTTCATGTTGTCGTGCCTCTCTTTCCTTTCCATGGCAGAGGTTATCTATCGTCCCACAGAGCTCTTCAGCATCAGCTGTGGCTCATCCATCAACTTCTCCACTCTCGACACTCGGAATTGGACTCCAGACATCCCTTTCCTCTCTCCAACCCACCACTCCTTTGCTGCTCCTTCACTCACACCATCTACCCTACAGGGTCCTTACACCCATGCTCGTCTCTCTCACTCCCCATTCACCTACTTATTCCCTGTCACGCCAGGCCCCAAGTTCATTCGCCTCTTTTTCTTCTCAACTTCATACCAAAACTTCCATCGCTCCCAAGCATCTTTTTCAGTCAAAGCAGGCCCCTACACCCTCCTTCGAGATTTCAATGCTTCACTCAACGCCGATGCTGATGATGACCCTAGCCACTCTGATATCCTTTTCAGAGAGTATTGCATCAACCTCCAAGATGGTGAGAAGCTCAACATAACCTTCCTTCCTAGCACCACACATTCCTACGCTTTCATCAACGGGATCGAGATTGTTTCGATGCCCCCTTATCTCTACTACACCGATCCTGACGACTACACAGAGCTGCCACAATATGTTGGCACCACGACCTCTTATGTCATTGAGAAGAAGTTTGCTCTCGAGACCATGTACAGATTAAAAGCTGGTGATCATACAATCTCCTCCTCTGAGGACACTGGTATGCTCAGGACTTGGGATGCTGATAGCAAGTACCTAGATACTCCAAGTGAAGAATCTCTTGAGTTTACGCATACAACTCTGCTGATCTTCACTAAGAAGACTCCTAACTTCACGGCACCAGATCAAGTTTTCCGATCCGTAAGGAATATGGGAATGAATGCCTCTCTCAACATGAGGAACAACATCACTTGGCAGCTTTCCGTTGATTCCGGCTTCACCTACTTGCTAAGGTTATACTTTTGTGAGCTTAACCCGAGAATTGAGGAGGCTGGTGTCCTGAGATTCTTCATCTTCATACATGATCAGTTGGCTACTGATTGGGCCGACGTTTTCTTGTGGACGAAAAAGTCGGGTGTGCCCGTGGTTAGAGAGTATGTAGTTATCATCTCAGAGAATCCGAAAAAAGTTAACCTTTCACTAAAAATGCATCCTCACCCTAAAAGCATGATCCGGGACGCACAAATAAATGCAATTGAAATCTTCAAAATCAGCAATTCTGAAGGCAGTCTCGCGGGACCAGATCCAGACCCTCCTACACAAACCCCAGTGGTTTCCCATCAAGGCTCAAACAAGAAAAGCGGCGCCTCCAAGAAAACCCTTGCCGCCGGGGCGGGAGCAGTTTTCGGTGTCATTTTGATCTCTTTAATTGTCGCTTTCTTCCTCGTCAAACGCAAGAAGAACATCGCCGGCGAAAGTAAAAAGGACGGAACTTCTCGCGGGGGTGGCTCAGCTCCACTACCAACCAACCTCTGCCGTCACTTCTCAATCGCAGAAATCATAGCCGCCACCAATAACTTCAACGAACTCTTCGTCGTTGGAATGGGAGGCTTCGGCAACGTGTACAAAGGCTACATTGATGATTCAACACCTGTGGCAATCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTCTGAGCGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGTCATCTCCATCTTGTTTCCCTCATCGGTTACTGCTACGAGAGCAACGAGATGATACTCGTTTACGATTTCATGGATCGTGGAACCCTCCGTGACCATCTCTACGGAACCAATAACCCTCCGCTCTCATGGAATCAAAGGCTTCATATATGCGTAGGTGCTGCACGAGGACTGCATTATCTGCATACAGGTGCCAAACAGATGATCATTCACCGCGACGTGAAGAGCACAAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTTGGGTTATCTCGAATTGGGCCCACGGGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAGGGCAGTGTAGGGTATTTAGACCCGGAGTATTACAAACGACAGCGTTTGACGGAGAAGTCGGACGTGTACTCGTATGGGGTGGTGCTGTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTCCGAATGGCGGAGAAGAAACAGGTGTCACTGGTAGATTGGGCGAAGCATCGGTATGAGAAGGGGTCTCTGGCAGAGATTGTGGATCCAGCACTGAAGGGGCAGATAGCACCTCACTGTTTGCGCAAATTTGGTGATGTTGCGCTGAGCTGTTTGCTTGAGGATGGGACTCGGCGACCTTCCATGAACGACGTGGTTGGGGTGTTGGAGTTTCTTCTACGACTTCAGCTTCAGGATAGTGCTCATGTTAATATAATGTTGGAGAGTGGTGGGGACTATGAGGGCACTACAACCGAGGACATGTTTATCAGTTCCCATAGTAATAGCAGTGGATTGAACACTACAAGCTACGGGAATACGGAATCTGACAGGTTGGTCCCTGAGAATGTTTTTTCTGAGCTTAAGGATCCAAAGGGACGTTGA 2619 0.4822 MVFELSSLCCFDQRLSMDTTCPPTALSGTILLLFMLSCLSFLSMAEVIYRPTELFSISCGSSINFSTLDTRNWTPDIPFLSPTHHSFAAPSLTPSTLQGPYTHARLSHSPFTYLFPVTPGPKFIRLFFFSTSYQNFHRSQASFSVKAGPYTLLRDFNASLNADADDDPSHSDILFREYCINLQDGEKLNITFLPSTTHSYAFINGIEIVSMPPYLYYTDPDDYTELPQYVGTTTSYVIEKKFALETMYRLKAGDHTISSSEDTGMLRTWDADSKYLDTPSEESLEFTHTTLLIFTKKTPNFTAPDQVFRSVRNMGMNASLNMRNNITWQLSVDSGFTYLLRLYFCELNPRIEEAGVLRFFIFIHDQLATDWADVFLWTKKSGVPVVREYVVIISENPKKVNLSLKMHPHPKSMIRDAQINAIEIFKISNSEGSLAGPDPDPPTQTPVVSHQGSNKKSGASKKTLAAGAGAVFGVILISLIVAFFLVKRKKNIAGESKKDGTSRGGGSAPLPTNLCRHFSIAEIIAATNNFNELFVVGMGGFGNVYKGYIDDSTPVAIKRLKPGSQQGLSEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYGTNNPPLSWNQRLHICVGAARGLHYLHTGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMAEKKQVSLVDWAKHRYEKGSLAEIVDPALKGQIAPHCLRKFGDVALSCLLEDGTRRPSMNDVVGVLEFLLRLQLQDSAHVNIMLESGGDYEGTTTEDMFISSHSNSSGLNTTSYGNTESDRLVPENVFSELKDPKGR* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01254 872 Pfam Malectin-like domain 57 427 IPR024788 -
Lapu1g01254 872 FunFam FERONIA receptor-like kinase 242 428 - -
Lapu1g01254 872 ProSiteProfiles Protein kinase domain profile. 530 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01254 872 FunFam receptor-like protein kinase FERONIA 494 605 - -
Lapu1g01254 872 FunFam Receptor-like protein kinase FERONIA 606 821 - -
Lapu1g01254 872 Gene3D - 242 429 - -
Lapu1g01254 872 Gene3D - 52 211 - -
Lapu1g01254 872 CDD STKc_IRAK 536 802 - -
Lapu1g01254 872 PANTHER OS03G0124300 PROTEIN-RELATED 31 491 IPR046957 GO:0004672
Lapu1g01254 872 Gene3D Phosphorylase Kinase; domain 1 500 605 - -
Lapu1g01254 872 FunFam FERONIA receptor-like kinase 54 212 - -
Lapu1g01254 872 MobiDBLite consensus disorder prediction 830 872 - -
Lapu1g01254 872 SMART serkin_6 530 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01254 872 SUPERFAMILY Protein kinase-like (PK-like) 508 804 IPR011009 -
Lapu1g01254 872 Pfam Protein tyrosine and serine/threonine kinase 536 799 IPR001245 GO:0004672|GO:0006468
Lapu1g01254 872 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Lapu1g01254 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Lapu1g01254 872 MobiDBLite consensus disorder prediction 433 459 - -
Lapu1g01254 872 MobiDBLite consensus disorder prediction 830 858 - -
Lapu1g01254 872 Gene3D Transferase(Phosphotransferase) domain 1 606 819 - -
Lapu1g01254 872 MobiDBLite consensus disorder prediction 445 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01254 Lapu-Chr1 25370551 25373529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01254 36 872 Receptor kinase-like Gene Family AT3G51550 45.161 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01254 Malectin_like 3.6e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01254 - - vun:114186088 1259.2