Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01253 ATGGCAGACGTTATTTACCACCCCACTGACCATTTCACCATCAACTGTGGCTCCTCAATAAACTTCTCTCTCGATGGTCGGAACTGGACTGGAGATAGCAATACCAAGTTCCTCTCCCAAAGCAACCACTCAGTTGCTGTTCCTCCACACACACAATCAACAATACAAGGTCCTTACACTTATGCTCGTCTCTCTTACTCCCAGTTCTCCTACTCCTTCCCCGTCACCACACAAGGCCCCTTTTTCCTTCGTCTCTTCTTCTACTCAACTTCATATCAGACCTTTAACCGCCCCAAAGCCTATTTCTCAGTCAAAGCAGGCGCATACACCCTTCTTCAACATTTCAATGCTTCTCTATATGCTGATACTGATGACGAACCTGGTCATCCTGACATCTTATTCAGAGAGTATTGCATCTACCTCCAACGTGGGCAGAGGCTCAACATAACCTTCACTCCAAGCACCACAGATTCTTACGCTTTCATCAATGGAATCGAGGTTGTTTCAATGCCCTCTTATCTCTACTATTCCAACACTAACTACAACGATCCTGAAGACTTCCTTAGATTGCCACAACTTGTTGGCTACGTGAACCGACCATATACCATTACAAACAACTTTGCTCTCGAGACGAAACACCGGTTGAAAGTTGGAGGAGCACAAATCTCCCCCTCACAGGATACTGGCATGCTCAGGGCTTGGGATGCGGATGATAAATACCTAATTACTGATAGTGGACCATCTGCTGATTATAAGAAAGAAACTAATCTCAGCTTCGTTAAGATTCCTAACTACACGGCACCGGATCAAGTATACCGAACCGTAAGGAATATTGGAACGAATCCTTTTAGGAACCTCACATGGCAGCTTCCTGTTTATTCTGGCTTCTTCTACTTACTAAGGTTACACTTTTGTCAGCTTAACCCGGAGGTTCAAGAGCAAGGTGATCAAATATTCTACATCTTCGTTCAGGGTCAGTCGGCTGAAAACGGGGCAGACATTCTCAAGTGGAGCGACAACCAGAAGGGTGTACCAGTGGTTAAAGACTACGCAGTTTACATCCCAGGGAATCGGGAAAAGGTATATCTTTCACTGGAAATGCATCCTCATCCTAGAAGCTTCATCCAGGATGCACAACTTAATGCAATTGAACTCTTCAAAATCAACGACACCACAGGTAGTCTCGCTGAACCAAATCCAGACCCTCTTCCACAAACCCCCAATAAGCAAATCTCAAAGAAGAAAAGTAGCGGCACCACGACCCCCCTAATTGCCGCCCTCGCAGGGGCAGTTTCTGGTGTCGTTTTACTCTCCTTTGTTGTCACTTTCTTCATCAAACGCAAGCAGCAGAACGTTACCGTTTACAAGGGTTCTCACAAAAAAGATGGAACTTCTCATGGGAGTGGCTCATCATCGCTACCAACCAACCTCTGCCGTCACTTCTCAATCGGCGAAATCAGGGCCGCCACAAACAACTTCGATAAACTGTTTGTCGTTGGAGTGGGAGGCTTCGGCGACGTGTACAAAGGCTACATTGACGGCGGCTCAACTCCTGTCGGTATAAAACGGCTCAAACCAGGTTCTCAGCAAGGTCTGAACGAGTTCATGAACGAGATAGAAATGCTCTCTCAACTTCGTCATCTCCATCTTGTTTCCCTAATCGGTTACTGCTACGAGAGCAACGAGATGATACTCGTTTATGATTTCATGGATCGTGGAACCCTACGTGACCATCTCTACGGAACTGATAACCCTCCGCTCTCATGGAATCAAAGGCTTCAGATATGCATAGGAGCCGCACGAGGACTGCATTATCTGCATGCAGGTGCGAAACAAATGATCATTCACCGTGATGTGAAGAGCACAAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTCGGGTTATCTCGAATTGGGCCCACGGGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAGGGCAGTGTAGGGTATTTAGACCCGGAGTATTACAAACGACAGCGTTTGACGGAGAAGTCGGACGTGTACTCGTATGGGGTGGTGCTGTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTACGAATGGCGGAGAAGAAACAGGTGTCACTGGTGGATTGGGCGAAGCATCGGTATGAGAAGGGGTCTCTGGGTGAGATTGTGGATCCAGCACTGAAGGGGCAGATAGCACCTTACTGTTTGCGCAAATTTGGTGAGATAGCTCTGAGCTGTTTGCTTGAGGATGGGACTCAGCGACCTTCCATGAACGACGTGGTTGGGGTGTTGGAGTTTGTTCTGCGGCTGCAGCCTCAGGATGGTGCTCATGTGAATGCTGTGTTGGAAAGTGGTGGGGATTATGAAGACAGTACTACTGAGGACATGTTTAGCAGTATCAATAGTGGTGTGCATGTTTCGGACTATAGTAACAGCAGTGGATTGAACACTACAAGCTACGGGAGTAAGGAATCTGACAGGTTGATCTCAGAGCTTGTTTTCTCTGAGATTAAGGATCCAAAGGGTCGCTGA 2535 0.4718 MADVIYHPTDHFTINCGSSINFSLDGRNWTGDSNTKFLSQSNHSVAVPPHTQSTIQGPYTYARLSYSQFSYSFPVTTQGPFFLRLFFYSTSYQTFNRPKAYFSVKAGAYTLLQHFNASLYADTDDEPGHPDILFREYCIYLQRGQRLNITFTPSTTDSYAFINGIEVVSMPSYLYYSNTNYNDPEDFLRLPQLVGYVNRPYTITNNFALETKHRLKVGGAQISPSQDTGMLRAWDADDKYLITDSGPSADYKKETNLSFVKIPNYTAPDQVYRTVRNIGTNPFRNLTWQLPVYSGFFYLLRLHFCQLNPEVQEQGDQIFYIFVQGQSAENGADILKWSDNQKGVPVVKDYAVYIPGNREKVYLSLEMHPHPRSFIQDAQLNAIELFKINDTTGSLAEPNPDPLPQTPNKQISKKKSSGTTTPLIAALAGAVSGVVLLSFVVTFFIKRKQQNVTVYKGSHKKDGTSHGSGSSSLPTNLCRHFSIGEIRAATNNFDKLFVVGVGGFGDVYKGYIDGGSTPVGIKRLKPGSQQGLNEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYGTDNPPLSWNQRLQICIGAARGLHYLHAGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMAEKKQVSLVDWAKHRYEKGSLGEIVDPALKGQIAPYCLRKFGEIALSCLLEDGTQRPSMNDVVGVLEFVLRLQPQDGAHVNAVLESGGDYEDSTTEDMFSSINSGVHVSDYSNSSGLNTTSYGSKESDRLISELVFSEIKDPKGR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01253 844 PANTHER OS03G0124300 PROTEIN-RELATED 6 451 IPR046957 GO:0004672
Lapu1g01253 844 FunFam FERONIA receptor-like kinase 11 171 - -
Lapu1g01253 844 SMART serkin_6 493 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01253 844 CDD STKc_IRAK 508 766 - -
Lapu1g01253 844 MobiDBLite consensus disorder prediction 394 416 - -
Lapu1g01253 844 FunFam Receptor-like protein kinase FERONIA 570 785 - -
Lapu1g01253 844 Pfam Protein tyrosine and serine/threonine kinase 499 763 IPR001245 GO:0004672|GO:0006468
Lapu1g01253 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Lapu1g01253 844 ProSiteProfiles Protein kinase domain profile. 493 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01253 844 Pfam Malectin-like domain 14 388 IPR024788 -
Lapu1g01253 844 Gene3D Transferase(Phosphotransferase) domain 1 570 781 - -
Lapu1g01253 844 Gene3D - 11 171 - -
Lapu1g01253 844 Gene3D - 208 389 - -
Lapu1g01253 844 FunFam receptor-like protein kinase FERONIA 455 569 - -
Lapu1g01253 844 SUPERFAMILY Protein kinase-like (PK-like) 467 768 IPR011009 -
Lapu1g01253 844 FunFam FERONIA receptor-like kinase 207 389 - -
Lapu1g01253 844 Gene3D Phosphorylase Kinase; domain 1 478 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01253 Lapu-Chr1 25360386 25362983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01253 6 844 Receptor kinase-like Gene Family AT3G51550 45.946 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01253 Malectin_like 4.2e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01253 - - vun:114186088 1213.75