Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01252 ATGTTTCTCAAATGTTTGGGTTTCTGTGATTGGAAGCACACAAGTTCATCTCAGAAACAATATCCTACGGTAATACAAGAGTTGTGTCATCAATTTTCTCTCACCGATCTTAAGAAATCAACAAACAACTTTCATCGTACCAGCCTAATTGGATATGCAAGCTTTGGTAAAGTATACAAAGGTCGCCTCCAACACGATGATGGCTCAGAATATACAGTTGCAATAAAGCGATTAAATGCAGAAGACATTGAAGGACGCGACCAGTTTAACAAAGAAGTAGAGTTGCTCTGTCATCTTCGTCACCCTAATTTTGTGTCTCTTATAGGATTCTGTAACCACAAAAAAGAGAGAATTCTTGTGTACGAGTACATGTCCAATAGATCTCTAGCTCGATACATACTAGGTGGGTATACAGAAGCACTGTCATGGAGGAAAAGGATAGAGATATGCATAGGAGTAGCTCGTGGACTGCACTACCTTCATGCCGGAGCCAAGCGCACCATCATGCACCGTGACATTTGTCTCGAAAACATTCTTCTGGATGACCACATGGAGCCAAAACTAGCAGGTTTCGGCCGTAGCATACAGGGAGCACGTTTTATGTCAAAGCCAAAACCAATTCGAATAGATGATTATACACGGGGTAGTTACGGCTACCATCCTATGAAGTATTTCAGAGACATTATCGTCACAGATAAATGTGATGTTTTCACATTTGGTATGGTTCTTCTTGAAGTGGTGTGTGGAAGAAGCTATTTTGACATGAGAGAAATCGAGGGATTTCTGGAGAAGCCTATTGAGGAGATTATTGATTTGAATATCAAAGGAAAGATTGCGCCAGAGTGTTGGAAAGTCTTTATAGATATCACCCAAAGATGTGTGAATTATGAAGCAGATGAGCGACCAACAATGGGTGAGGTAGAGGTGCAACTTGAGTATGCTCTGTCGTTGCAGGAACAAGCAGATATCACAAACATCGACGGTGATTATATCTTATTGTCTAAAACCATCATTAACCTAATGCCT 1026 0.4074 MFLKCLGFCDWKHTSSSQKQYPTVIQELCHQFSLTDLKKSTNNFHRTSLIGYASFGKVYKGRLQHDDGSEYTVAIKRLNAEDIEGRDQFNKEVELLCHLRHPNFVSLIGFCNHKKERILVYEYMSNRSLARYILGGYTEALSWRKRIEICIGVARGLHYLHAGAKRTIMHRDICLENILLDDHMEPKLAGFGRSIQGARFMSKPKPIRIDDYTRGSYGYHPMKYFRDIIVTDKCDVFTFGMVLLEVVCGRSYFDMREIEGFLEKPIEEIIDLNIKGKIAPECWKVFIDITQRCVNYEADERPTMGEVEVQLEYALSLQEQADITNIDGDYILLSKTIINLMP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01252 342 ProSitePatterns Tyrosine protein kinases specific active-site signature. 168 180 IPR008266 GO:0004672|GO:0006468
Lapu1g01252 342 ProSiteProfiles Protein kinase domain profile. 44 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01252 342 Gene3D Phosphorylase Kinase; domain 1 6 123 - -
Lapu1g01252 342 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
Lapu1g01252 342 PANTHER OS07G0166700 PROTEIN 28 318 IPR045272 GO:0004714|GO:0006468
Lapu1g01252 342 FunFam Receptor-like protein kinase ANXUR2 9 123 - -
Lapu1g01252 342 SUPERFAMILY Protein kinase-like (PK-like) 19 315 IPR011009 -
Lapu1g01252 342 FunFam Receptor-like protein kinase ANXUR2 124 333 - -
Lapu1g01252 342 Pfam Protein tyrosine and serine/threonine kinase 48 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01252 Lapu-Chr1 25355304 25356404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01252 14 322 Receptor kinase-like Gene Family AT3G51550 39.375 2.15e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01252 PK_Tyr_Ser-Thr 3.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01252 - - gmx:100305395 441.425