Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01250 ATGGCTCACACAGTGAAGGTGATAGAACACTGTGAAGTTAGTCCTCCACCTGGTTCTGTTCCTTCAACCTCTGTCCCTCTCTCTTTCTTCGATCTTCCATGGCTTTGTTGCCCCCCTGCCAAACGTATCTTCTTCTATGACTTCCCTTATTCCACCCCACACTTCTTCCAAACTCTCCTTCCAAATCTCAAGAACTCTCTTTCCCTCACTCTCCAACACTTCTTCCCTTTCTCTTCCAAACTTGTCTTCCCTCCAAAGCCAAACCCCCCTCACATCCTCTACTCACACGCTCATTCTGTCTCCTTCACAGTAGCTGAGTCCTCAGCAGATTTCATCACCCTTCTGTCTGATTCCCCAAAAGACGTCACAGCTTTGCACCCTTTTGTTCCTGTGTTGCCTCCACCACAAACCTTAGAAGATGGCACGCTTCTGATCCCTCTCATGGCCATTCAGGCCACTGTTATGCCCCATTCTGGCTTCACCATATGCATCACTTTCAGACACGTGGCTGCTGATGGGAGAGCTTTTCATCACTTCATGAAATTCTGGGCCTCTATTTGTAAGTCCAATGGAGACTTGAGTTTGGCTTCCCCTTCTATGCCATTGCACAATAGGGACATCATTCCAGACCCCAAAGGCCTTAAGCACATTTTCTTACAAGAATTGTCGAATTTCTTACCAGAAAATGTAGAGTCCAAGGGCGAAATACGTGATGTTCCTAGTGACATGGTGCGTCATACGTTTGTCTTGAGTCATGACCATGTTGAGAAACTCAAGAAATGGGTCTCTACTAAATGCAAAAGCCATGGTCTAGAATTACCACACATAACAACCTTTGTGGTGACATGTTCTTTGATTTGGGTTTGTATGGTGAAATCAGAAGAGACTAAAGCTGGTACGGTACTTCCAAATAATGACGAGTCCTACATCTTGGCCTTCATGGCAGATTGTCGTAATCTTCCTGAATTTTCAATTCCATTGGAATACTTTGGAAATTGTTTGGCTTGTGGCAATGCTGAAGTCAAGAGGGGGAAGCTTGTGGGTGGAAATGGTATTTTGGAGGCAGCCATTGCTATTGGTGGTGAAGTTAGATATCTGCAACGTGGAACTTTTGACGGGGTTGAAACATTGATGTCAAATTTTACAGAATTTGCCACGTTGGGGAAGCATATGACAATAATTGCAGGGTCACCAAATCTGGAAGTGTATGAAACTGACTTTGGGTGGGGAAAGCCAAAGAGGAGTGAAGTGGTTCATGTAGATTATTCAGGATTAATTTCCCTTTCTGACTGTAGAGACAAAGGTCGAATTGAAGTTGGGTTAGCACTTCAAAATATTCATATGAAAAAATTCATTACCATTTTGGAAGAGCACCTCACAGAAATTAGCGTTCTTGACTGA 1401 0.4383 MAHTVKVIEHCEVSPPPGSVPSTSVPLSFFDLPWLCCPPAKRIFFYDFPYSTPHFFQTLLPNLKNSLSLTLQHFFPFSSKLVFPPKPNPPHILYSHAHSVSFTVAESSADFITLLSDSPKDVTALHPFVPVLPPPQTLEDGTLLIPLMAIQATVMPHSGFTICITFRHVAADGRAFHHFMKFWASICKSNGDLSLASPSMPLHNRDIIPDPKGLKHIFLQELSNFLPENVESKGEIRDVPSDMVRHTFVLSHDHVEKLKKWVSTKCKSHGLELPHITTFVVTCSLIWVCMVKSEETKAGTVLPNNDESYILAFMADCRNLPEFSIPLEYFGNCLACGNAEVKRGKLVGGNGILEAAIAIGGEVRYLQRGTFDGVETLMSNFTEFATLGKHMTIIAGSPNLEVYETDFGWGKPKRSEVVHVDYSGLISLSDCRDKGRIEVGLALQNIHMKKFITILEEHLTEISVLD* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01250 466 PANTHER - 5 459 - -
Lapu1g01250 466 Pfam Transferase family 18 452 - -
Lapu1g01250 466 Coils Coil 466 466 - -
Lapu1g01250 466 Gene3D - 239 461 IPR023213 -
Lapu1g01250 466 Gene3D - 4 234 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01250 Lapu-Chr1 25344271 25346095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01250 43 457 Monolignol Biosynthesis Gene Families AT5G48930 23.326 6.60e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01250 - - gmx:100782335 796.964