Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01248 ATGGGGTTCTCTCTGTTGCCAAAAGCAACTCCTTGCATTTTGTTCCTGGTTCTGCTGTATTGTACTTGCTTCACCTCAACAGATGCTTATGATCCGCTTGACCCAAATGGAAATATCACAATCAAATGGGATATTATAAGTTGGACCCCTGATGGATATGTAGCTGTTGTTACAATGAACAATTTCCAACAATATCGTCATATTGCTTCACCTGGCTGGTCACTAGGATGGACATGGGCAAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAAACCACTGAACAAGGAGATTGTTCAAAATTTAAGGGAGGTATTCCACATTGCTGTAAGAAAGATCCTACGGTTGTGGATTTGCTTCCTGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGGGTGCTCAGTTCATGGGTGCAGGATCCGACCAATGCAGTTTCATCATTTCAAGTTAGTGTTGGTAGAGCTGGAACCACAAACAAAACTGTCAAAGTCCCAAAAAACTTTACCTTGAAAGCACCAGGACCAGGTTATACTTGTGGTCCAGCCAAGATTGTGAAATCCACTCAATTCATTCAAGCAGACAAAAGAAGAGTGACCCAAGCACTGATGACATGGAATGTGACATGCACATACTCACAATTTCTAGCTCAGAAAACTCCCTCTTGCTGTGTTTCACTTTCATCTTTCTATAATGATACTATTGTGCCATGCCCAACATGTGCATGTGGCTGCCAGGGTAACTCATCTCGGTCAGGAAGCTGTGTGGATTCAGATACCCCACATTTGGCATCGGTTGTTTCTGGCTCTGGGAAGAATAATTTTTCCCCTTTGGTTCAATGTACTAGTCATATGTGTCCTGTCCGAATCCACTGGCATGTTAAGCTAAACTACAAGGAGTACTGGCGTGTAAAGGTTACTATTACTAATTTTAATTACAGGATGAACTATTCTGAGTGGAACATGGTTGTTCAACATCCAAACTTTGACAATTTGACTCAACTCTTCAGTTTCAACTACAAGTCATTGACCCCTTACGGCTCAATAAATGATACAGCAATGCTATGGGGAGTTAAGTTCTATAATGATTTTCTCAACCAAGCTGGCCCTAATGGCAATGTTCAATCCGAGCTACTCTTCCGAAAGGATAAAGCCACTTTTACTTTTGATAAGGGATGGGCTTTTCCTCGAAGGATCTACTTCAACGGTGACAACTGTGTCATGCCACCACCTGATGCTTATCCGTGGTTACCTAATGCTGGCTCTCGGCAAGAGGTTTCCTTGTTTGCTTTAGTGATAGCTTCTTTGGTAGCCTTGGTGTTTTATGCCCACGCATAA 1347 0.4239 MGFSLLPKATPCILFLVLLYCTCFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPTNAVSSFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVKSTQFIQADKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVPCPTCACGCQGNSSRSGSCVDSDTPHLASVVSGSGKNNFSPLVQCTSHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVIASLVALVFYAHA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01248 448 PANTHER PROTEIN COBRA 17 437 IPR006918 GO:0010215|GO:0016020
Lapu1g01248 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0016020
Lapu1g01248 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01248 Lapu-Chr1 25323625 25334663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01248 1 443 COBRA Gene Family AT3G02210 74.279 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01248 - - gmx:100783820 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01248 1 25323625 25334663 Lapu1g01248 1 25323625 25334663 ECH
Lapu4g01272 4 29679171 29682317 Lapu1g01248 1 25323625 25334663 PCT