Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01247 ATGAGGCTTGTCATATCAGCTGTATGTGCTCTTGTGCTATTTTCTTATGCAGCTGCGTATGATCCTTTGGATCCAAATGGAAACGTAACGATCAAATGGGATGTTGTCTCTTGGACACCAGATGGCTATGTAGCAGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCGGGATGGACCTTGTCGTGGACATGGGCAAAGAAGGAAGTAATATGGTCCATGGTAGGAGCTCAAACAACAGAGCAAGGAGACTGCTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGGGTACCTTACAACCAACAATTCTCAAACTGTTGTAAGGGTGGAGTGGTGGCAGCATGGGGTCAAGACCCTTCAGCAGCAGTTTCATCCTTCCAAGTGAGTATTGGGCTAGCTGGTACTTCAAACAAGACAGTTAAACTTCCCAAGAACTTCACTCTCTTGGGTCCAGGACCAGGCTACACTTGTGGCCCTGCCAAGGTTGTTCCTTCCACCGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCAAGAAAGAACCCAGGTTGCTGTGTATCTTTGTCATCCTTTTACAATGAGACCATTACCCCCTGTCCCTCTTGTGCGTGTGGATGCCAGAACAAGAGGAACTGTGTCAAGAGTGATTCTAAACGTATCAACATGGTGGGAATTCACACTCCAAAGAAAGACAATGAACCATTGTTACAGTGCACTCATCATATGTGCCCAATAAGGGTACACTGGCACGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGGTTGCCGTAACAAATTTCAACTACAGGATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAACGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTCTACTTCCCTACGAGTCCATAAACGACACTGGCATGTTCTATGGTATGAAATACTTTAACGATCTCTTGATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAAGATAAGGATACATTCACACTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAATGGAGAAGAATGCATGCTGCCACCGCCAGATACCTACCCGATCCTCCCTAACTCTTCCCCTTTGAACCTATTAAACTTCCCAGCATTCATTTTCACAATGCTTGTCATGCTAGCTGTTTGGTAA 1296 0.4506 MRLVISAVCALVLFSYAAAYDPLDPNGNVTIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLSWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAVSSFQVSIGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPSCACGCQNKRNCVKSDSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKDKDTFTLKQGWAFPRKVYFNGEECMLPPPDTYPILPNSSPLNLLNFPAFIFTMLVMLAVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01247 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Lapu1g01247 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Lapu1g01247 431 PANTHER PROTEIN COBRA 8 424 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01247 Lapu-Chr1 25321026 25323556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01247 1 430 COBRA Gene Family AT3G29810 63.098 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01247 - - gmx:100784352 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01247 1 25321026 25323556 Lapu1g01247 1 25321026 25323556 ECH
Lapu4g01271 4 29675579 29678409 Lapu1g01247 1 25321026 25323556 PCT
Lapu1g01247 1 25321026 25323556 Lapu4g01272 4 29679171 29682317 PCT