Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01243 ATGTTTCTGAATTGTTTGGGCATGTGCTGTTCCAAGCCCACAACGAATACAAATTCATCTCAGAGACAGTTTCCAACAGTGATAGAAGAGCTGTGCCAACAATTTTCTCTCACCGATCTTAGGAAAGCCACCAACAACTTTGATCTAAACAGAGTAATAGGACGTGGATTATTTAGTGAAGTATACAGAGGTTGTCTACAGCATAATGGTGCTTCTGATTACACGGTCGCAATAAAGAGATTTAATGATCAAGGATGGGAAGCGTTCAACAAGGAAATAGAATTGCTATGCCAGCTTCGTCACGCTAGATGTGTGTCTCTCATAGGATTCTGCAACCACGAAAATGAGAATATTCTTGTATATGAGTACATGTCCAATGGATCTCTAGATGAACACCTACAAGATGGTGAACTATCATGGAAGAAAAGGCTAGAGATATGCATAGGAGTAGCGCGTGGACTACACTACCTTCACACTGGAGCCAAGCGTTCAATCTTTCACTGTATCCTGGGTCCTAGTACCATCCTTTTGGATGAGCAAATGGAGCCAAAACTCGCTGGTTTCGGTATTAGCGTGCAGGGATCACGTTTTATGTCAAAGCAGAAACAAGTCGATGTAGAGCATGTTATGGGTACTTGGGGCTACTTGGTTACGGGGTATGTCATGGATGGTACCATCACAGCTAAATGGGATGTTTTCTCGTTTGGTTTAGTTCTACTACATGTTGTGTGTAGGAGGATGTATAATTTAATAATCCCTCCTGAAAAAGAATTTCTGGAGAATCCTGTTGAGGAGAAAATTGATCCGATTATCAAAGGAAAGATTGCACCGGATTGTTGGCAAATCTTTGTAGATATCATGGCAAATTGCTTGAAGTATGAAGCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTGCAACTTGAGCATGCTCTATCGATGCAGGAACAAGCAGATGTCACAAACTCCATCTGTGATTATACCTTGTTGTCCAAAACCTTTATTCCCCTGGGAGTGAAACAGAATGTGATACTCAGAAGAAATGCAAGTGACTAG 1056 0.4167 MFLNCLGMCCSKPTTNTNSSQRQFPTVIEELCQQFSLTDLRKATNNFDLNRVIGRGLFSEVYRGCLQHNGASDYTVAIKRFNDQGWEAFNKEIELLCQLRHARCVSLIGFCNHENENILVYEYMSNGSLDEHLQDGELSWKKRLEICIGVARGLHYLHTGAKRSIFHCILGPSTILLDEQMEPKLAGFGISVQGSRFMSKQKQVDVEHVMGTWGYLVTGYVMDGTITAKWDVFSFGLVLLHVVCRRMYNLIIPPEKEFLENPVEEKIDPIIKGKIAPDCWQIFVDIMANCLKYEADERPTMGEVEVQLEHALSMQEQADVTNSICDYTLLSKTFIPLGVKQNVILRRNASD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01243 351 Gene3D Transferase(Phosphotransferase) domain 1 124 330 - -
Lapu1g01243 351 FunFam Receptor-like protein kinase ANXUR2 11 123 - -
Lapu1g01243 351 Gene3D Phosphorylase Kinase; domain 1 8 123 - -
Lapu1g01243 351 ProSitePatterns Protein kinases ATP-binding region signature. 53 79 IPR017441 GO:0005524
Lapu1g01243 351 PANTHER OS07G0166700 PROTEIN 31 315 IPR045272 GO:0004714|GO:0006468
Lapu1g01243 351 SUPERFAMILY Protein kinase-like (PK-like) 21 308 IPR011009 -
Lapu1g01243 351 FunFam Receptor-like protein kinase ANXUR2 124 330 - -
Lapu1g01243 351 ProSiteProfiles Protein kinase domain profile. 47 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01243 351 Pfam Protein tyrosine and serine/threonine kinase 49 307 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01243 Lapu-Chr1 25270971 25274784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01243 3 319 Receptor kinase-like Gene Family AT3G51550 40.356 2.06e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01243 PK_Tyr_Ser-Thr 7.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01243 - - pvu:PHAVU_008G028600g 550.436