Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01241 ATGTTTCTCAAATGTTCTGGAGAAACAAGTTTCTCTCGGAGACAGTATCCAACAGTAATAGAAGAGCTTTGCCATCAATTTTCTCTCACTGATCTTGGGAAATCCACCGACAACTTTGATCAGAACAGAATAATTGGATGTGGAAAATCTGGTAAAGTATACAAGGGTTGTCTCCAACACAATGATGCTTCAGATTATACAGTTGCAATAAAGCGATTCCAGTTGGAACTGTATCAAGCATGGGGAGAGTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTCGTCACCCTAATTGTGTGTCTCTTATAGGATTCTGCAACCACAAGAAAGAGAAGATTCTTGTGTTGGAGTACATGTCCAATGGATCACTATATCAACACCTACGACGTGGGGAACTGTCATGGAAGAAAAGGTTGGAGATATGCGTAGGTGCAGCGCGTGGACTACATTACCTTCACGCTGGAACCAAGCGCACAATCATTCACCGTAACATCAAACCTGGAACTATTCTTTTGGATGACAATATGGAGACAAAACTCGGAGGTTTCGGCATTAGCGTACAGGGAGGACGTTGTATGTCAAAGCCAAAACCTATTAAAGTAGATAGTCTTTCGGGTTCTTGGGACTACATGCCCAGGGAGTATTTGAAGGACCGTGTCGTCACCGATAAATATGATGTTTATTCTTTTGGTGTGGTTCTACTTGAAGTTCTATGGGGAAAGACCGATTATTTATTGACCGCACCAGCAATAAAACTTATGGAAAATCCTGTTGAGGAGAGTATTGATCCAAATATGAAAGGAAAGATTGCACCTCAATGTTGGCAAGTTTATATAGATATCATCCATAGATGCATCAAGTATGAACCGGATGAGAGACCGACGATGGGTGATGTAGAGATGCGGCTTCAGCATGCTCTTGCTTTGCAGAAACAAGCAGATATCACAAACATCAATGCTGATGATTATACTTTATTTTCCAAAACCATTATTCCCCATCCGGCAAATAAAATATAG 1017 0.41 MFLKCSGETSFSRRQYPTVIEELCHQFSLTDLGKSTDNFDQNRIIGCGKSGKVYKGCLQHNDASDYTVAIKRFQLELYQAWGEFKNEIELLCQLRHPNCVSLIGFCNHKKEKILVLEYMSNGSLYQHLRRGELSWKKRLEICVGAARGLHYLHAGTKRTIIHRNIKPGTILLDDNMETKLGGFGISVQGGRCMSKPKPIKVDSLSGSWDYMPREYLKDRVVTDKYDVYSFGVVLLEVLWGKTDYLLTAPAIKLMENPVEESIDPNMKGKIAPQCWQVYIDIIHRCIKYEPDERPTMGDVEMRLQHALALQKQADITNINADDYTLFSKTIIPHPANKI* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01241 338 Gene3D Transferase(Phosphotransferase) domain 1 119 328 - -
Lapu1g01241 338 PANTHER OS07G0166700 PROTEIN 24 310 IPR045272 GO:0004714|GO:0006468
Lapu1g01241 338 Gene3D Phosphorylase Kinase; domain 1 5 118 - -
Lapu1g01241 338 ProSiteProfiles Protein kinase domain profile. 39 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01241 338 FunFam Receptor-like protein kinase ANXUR2 119 326 - -
Lapu1g01241 338 SUPERFAMILY Protein kinase-like (PK-like) 13 303 IPR011009 -
Lapu1g01241 338 FunFam Receptor-like protein kinase ANXUR2 5 118 - -
Lapu1g01241 338 Pfam Protein tyrosine and serine/threonine kinase 42 301 IPR001245 GO:0004672|GO:0006468
Lapu1g01241 338 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01241 Lapu-Chr1 25265108 25266201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01241 6 314 Receptor kinase-like Gene Family AT3G51550 39.752 2.32e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01241 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01241 - - gmx:100305395 460.685