Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01240 ATGTTTCTGAAATGTTTGGGCAACACAAGTTCATCTGAGAAACAGTATCTAACAGTAATAGAAGAGTTGTGCCATCAATTTTCTCTTGCCGAGCTTAGAAAGTCAACCAACAACTTCGATAGAAAGAGACTAATTGGACGTGGAGGATTTGGTGAAGTATATAAAGGATATCTCCAACATTATGCTGCTTCTAATTATATAGTAGCAGTGAAGCGCTTTTCTGTGGAACACACTCAAGTGTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTCGTCACCCTAATTGTGTGTCTCTTATAGGATTCTGCAACCACAAGAAAGAGAAGATTCTTGTGTACGAGTACATGTCCAATGAATCTCTTGATCGACACCTACAACGTGGGGAGCTGTCGTGGAAGAAAAGGTTGGAGATTTGCACAGGAGCAGCGCGTGCACTACACTACCTTCACTCAGGAGCCAAGCGCACCATCATTCACCGTATTGTCAAACCTAGAACCATTCTTTTGGATGACAACATGCACCCAAAGCTCACGGGTTTCTGCATTAGCGTAAAGGGGTCACGCTTGATGTCAAAGCCAAAGCCAATTAAAGTTGATGTTGTGGCAGGTACTCCTGGATACATGGCTAGGGAGCTTTTCACGGACGATGCCATCACAGATAAATCTGATGTTTATTCTTTTGGTATGGTTCTGCTAGAAGTTGTGTGTGGAAGGAAGTACGTAACAATGCCAATTGAAACAGAATTTCTGGAGAAGCCTGTTGAGGAAAAAGTTGATGCGAGCATCAAGGGAAAGATTGCACCAAGGTGTTGGGAAGTCTTTATAGATATTACCAAAAGATGCGTTATGTATGAACCAGATGAACGACCAACTATGGGTGAAGTAGAGGTGGAACTAGAGCATGCTTTGTCTTTGCAGGAACAAGCAGATATCACAAATAATAGTGGTGATTATACATTATTTTCCACCACAGTAATTCACCCAGGAGCTGAACTGGTATACAGCACAGAAGACAGTGATACCGAAGAAATGTAA 1035 0.4203 MFLKCLGNTSSSEKQYLTVIEELCHQFSLAELRKSTNNFDRKRLIGRGGFGEVYKGYLQHYAASNYIVAVKRFSVEHTQVFKNEIELLCQLRHPNCVSLIGFCNHKKEKILVYEYMSNESLDRHLQRGELSWKKRLEICTGAARALHYLHSGAKRTIIHRIVKPRTILLDDNMHPKLTGFCISVKGSRLMSKPKPIKVDVVAGTPGYMARELFTDDAITDKSDVYSFGMVLLEVVCGRKYVTMPIETEFLEKPVEEKVDASIKGKIAPRCWEVFIDITKRCVMYEPDERPTMGEVEVELEHALSLQEQADITNNSGDYTLFSTTVIHPGAELVYSTEDSDTEEM* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01240 344 ProSiteProfiles Protein kinase domain profile. 39 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01240 344 Gene3D Transferase(Phosphotransferase) domain 1 116 323 - -
Lapu1g01240 344 PANTHER OS07G0166700 PROTEIN 24 306 IPR045272 GO:0004714|GO:0006468
Lapu1g01240 344 FunFam Receptor-like protein kinase ANXUR2 5 115 - -
Lapu1g01240 344 Pfam Protein tyrosine and serine/threonine kinase 42 297 IPR001245 GO:0004672|GO:0006468
Lapu1g01240 344 Gene3D Phosphorylase Kinase; domain 1 4 115 - -
Lapu1g01240 344 FunFam Receptor-like protein kinase ANXUR2 116 321 - -
Lapu1g01240 344 SUPERFAMILY Protein kinase-like (PK-like) 13 298 IPR011009 -
Lapu1g01240 344 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01240 Lapu-Chr1 25262307 25263422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01240 8 310 Receptor kinase-like Gene Family AT3G51550 42.188 3.20e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01240 PK_Tyr_Ser-Thr 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01240 - - gmx:100305395 469.544