Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01204 ATGACGATTGGTAGTTTAGCACCTAAGACAGAGAAGAAGAGATCAAGGAAGAACAAGGCAGTGGTCAATGAGAATGCACCCTTGTTGCCAAAAAGTCAGGTTCAGGAGAGTGATGCTGGGTTTGATGACTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAATTTATCCACCACAATTATTGGTGCTGGAATCATGGCGTTGCCTGCAACCTTGAAACAGTTGGGGATGGTGCCTGGCCTTGTTGCTATCATAATCATGGCCTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTAGATTTACCCGGGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAAATATGGAAAAGCTCTGGTGCAGATATGTGTTATAATCAATAACATCGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCCGGTACATCTTCAGGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACAGGACGGACATTTGTTGTTCTTCTTACAACACTTGCCATATTTGCACCCCTTGCAAGTTTTAAACGAATTGATTCATTGAGATTCACATCTGCCCTTTCAGTTGCACTAGCAGTTGTTTTTCTAGTCATTGCTGTGGGAATTGCAGTTGTGAAGATAATAAGTGGAGGCATTGCGATGCCCAGACTCTTCCCGGTCACCACAGATGTGGCATCATTCTTTAAACTATTCACTGTAGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAACGTTCACAGCATAGACAATGAGCTTGAAGACTCCTCACAGATGCGAGGGGTTGTACAAACTGCCCTTGCTCTATGCTCTTCAGTGTATGTAATGATAAGCTTCTTTGGTTTCCTCCTATTTGGCGAAGGAACTCTTGATGATGTGTTGGCCAATTTCGATACCAATCTTGGAATCCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTATGCAGCACACCTGATGCTTGTATTCCCAGTTGTCTTCTATCCATTGCGGCTCAATATAGATGGTCTCCTCTTCTCTTCATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCTCTGACTATTTCCCTTATTGGTGTCATCTTCCTGGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAGTTTACTGGAGCAACTGCCGCAGTCTGCATAGGATTCATTTTTCCAGCTGCCATCACTCTTAGGGACCGTTACAACATTGCAACTAAATCAGACAAGATCTTATCTGTTGTTATGATAGTCTTGGCTGTCTTCTCTAACGTGGTGGCTATATACAGTGATGCCTATGCCTTGATTAAGCAGAACCAAACATCACGCGAATGA 1398 0.4342 MTIGSLAPKTEKKRSRKNKAVVNENAPLLPKSQVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMVPGLVAIIIMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSGGDHHYGILEGWFGVHWWTGRTFVVLLTTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIISGGIAMPRLFPVTTDVASFFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALALCSSVYVMISFFGFLLFGEGTLDDVLANFDTNLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLDNFRFASLTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSVVMIVLAVFSNVVAIYSDAYALIKQNQTSRE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01204 465 MobiDBLite consensus disorder prediction 1 22 - -
Lapu1g01204 465 Pfam Transmembrane amino acid transporter protein 47 451 IPR013057 -
Lapu1g01204 465 PANTHER AMINO ACID TRANSPORTER 45 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01204 Lapu-Chr1 24993246 24996736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01204 3 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.819 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01204 K14207 - gmx:100796345 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01204 1 24993246 24996736 Lapu1g01204 1 24993246 24996736 ECH