Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01201 ATGCAGGCCAGGGAGATCACAGGACTGAATTATTTACTCCCTTCAGACCCTTGTCCTTACCCGGGTCACTACAGCATGACTCAGAACACCATCCCCACATTTCAACTCCACAAACTCTCAAACCAATTCTATGGTTTCCAAAACCCTCAGCAAGTGGTTGCAGAATTCAGCCCCCCTCAGTCCTCATGCATCAGCAGCACCTCCACCTCTGATGAAGCAGATGAGCAACAGCAAAGTCTCATCAATGAGAGGAAGCACAGGAGGATGATATCGAACCGTGAGTCAGCACGCAGGTCACGCATGAGGAAGCAGAAGCACCTTGATGAACTGTGGTCACAGGTGGTTTGGCTGAGGAATGAAAACCACCAGCTTATGGACAAGCTGAACCATGTGTCTGAGTCACATGATAGAGTTGCTCAGGAGAATGTTCAGCTGAGAGAAGAAGCCTCAGAACTTCGCCAAATGATATGTGACATGCAGCTACATAGTCCATACCACCCTCCTCCCTTGAGCCCCATTGAAGATGATGTCTCTCCATATGTCAAATCTGATTCCTCAATCACAAGCTCCTTGAACCTTCTTGGTTGA 588 0.483 MQAREITGLNYLLPSDPCPYPGHYSMTQNTIPTFQLHKLSNQFYGFQNPQQVVAEFSPPQSSCISSTSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDRVAQENVQLREEASELRQMICDMQLHSPYHPPPLSPIEDDVSPYVKSDSSITSSLNLLG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01201 195 MobiDBLite consensus disorder prediction 57 83 - -
Lapu1g01201 195 Coils Coil 135 155 - -
Lapu1g01201 195 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 166 IPR044521 -
Lapu1g01201 195 MobiDBLite consensus disorder prediction 57 76 - -
Lapu1g01201 195 FunFam BZIP transcription factor 82 133 - -
Lapu1g01201 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Lapu1g01201 195 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Lapu1g01201 195 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Lapu1g01201 195 Pfam bZIP transcription factor 84 134 IPR004827 GO:0003700|GO:0006355
Lapu1g01201 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Lapu1g01201 195 Gene3D - 82 137 - -
Lapu1g01201 195 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01201 Lapu-Chr1 24958646 24959512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01201 43 179 bZIP Transcription Factor Family AT3G30530 63.571 8.66e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu1g01201 bZIP_1 7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01201 - - gmx:780548 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01201 1 24958646 24959512 Lapu1g01201 1 24958646 24959512 ECH
Lapu2g01223 2 22178059 22178902 Lapu1g01201 1 24958646 24959512 PCT