Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01178 ATGGATGCGCGTAGAGCTCCACGCGCCGTCATTGATCCTAAGGTCCGCAGAGTCGGCTTCTTCGCGCCGCCCGACCGCTCTCAATCGGGTCCACCCGACCCGTCCTCATTTGACGTCTCTCCCGCAGCCAACTCCCTCTCGCCGGTCATGATCCCGCCGCCGCGCCATTCGTCGGAGAATCTCAGCCTCCACACGCGTCCCGCCGCGACTTCTCCCTCAGGCGAGGAATCCGTCACTGCCGGGAGCTATTCCAGCTCATCGGAGTTCTTCCCCGCTCCGATGTCCCCGGCGCCGTCCTCTTACTCGAGCAGGATCGTCGCCGACGACGGAGACTTCTTCGACGGCGGTAAGGTGGCGTCCTCGTTCCCTCGCTGCGGGTTTGACTTGACGACGACGAATGTCAGTAGCGTTCCAGCGAGCGAATTAACCACGATTGCGGTGGTGAATGCTGATTCCCTTGCGATTCGCGAGAGAGAGAGAGCAACCAAAGGAGGAGGATCAGGGGTGGAAGTGAAAGACCAAGCTCTGAATACTAAACCGAAGAAAGAAAAGACCTCAAAAGCAGAAAGACGAGCTCTTCAAGAAGCTCAACGAGCTGCTAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTCTTGCTTCAGTGAATGTAAAACCAGCTAAAGCTGCTAAGCCCCCACAAAAAGTTGATAATGTTTCAGTTGCAGCCTCTGAGAAGAAAGGGGGTGATCGTCCACAAGAAAAAGATAGAAAGAAAGATGTTCCTCAACCACGTATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCCAAACGGCGTGCTGTGGTAAAACAAACTGAAGCTAAGAACAGAGTTGAACTATTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTCCCAGATCTTGAGGCAAAGTTTTTCCAGCTTGGCCCAGTGCATCCCGCTTTTTATAAGGTAGGTTTGCAGTATCTGTCTGGAGATGTAACTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTTCAGGAGGCCATTAAAGACTATAGGGTTCCATCCGAGAAGACTCTGGTGAGAGACTTAACAGCAAAATTAAGTAGTTATGTTTCTTTTCTCATTGAGTGTCGACCACTTTCTATCAGTATGGGCAATGCAATTAGATTTCTCAAAAGTCGAATTGCCAAACTACCTTTGACGCTGTCGGAGTCAGAATCAAAAACCTCTCTTCAATCAGATGTTGAGCGTTTTATAAATGAGAAAATTATACTTGCGAACAAGGTGATAGTCAAGCATGTTATCACAAAAATAAGAGACGGTGATGTTCTTCTTACTTATGGGTCTTCATCAGCGGTTGAAATGATACTGTTACATGCACACGAGTTAGGTAAACAGTTTCGCGTTGTAGTGGTAGACTCTCGTCCAAGACTTAGGGGGAAACTTTTGCTTCGTAGGCTTGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGAATGAAGTTACTCGAGTATTTCTGGGTGCTTCATCGGTGTTGTCTAATGGAACAGTTTACTCAGGAGTTGGGACTGCTTGTGTTGCAATGGTTGCCCACGCATTTCGTGTCCCTGTTTTAGTATGTTGTGAGGCTTATAAATTTCATGAAAGGGTGCAGCATGATTCCATATGCTCGAATGAGCTTGGTGATCCAGACGTCATTTCTAGGGTTCAGAGTAGAGAGGATGTCAACCACTTGGAAGCTTGGGCCAATACTGAAAATCTGCAACTTCTAAATCTGATCTATGATGCAACACCTTCAGATTACGTTTCCATGATAATCACAGATTATGGAATGGTAAGTGCTACAATTAAAGAAGATTATTTAGTTGCTGCTAGCAAATACCTAAAGTGTGCCTTATGCCGGGCACCCCTACGTTAG 1947 0.471 MDARRAPRAVIDPKVRRVGFFAPPDRSQSGPPDPSSFDVSPAANSLSPVMIPPPRHSSENLSLHTRPAATSPSGEESVTAGSYSSSSEFFPAPMSPAPSSYSSRIVADDGDFFDGGKVASSFPRCGFDLTTTNVSSVPASELTTIAVVNADSLAIRERERATKGGGSGVEVKDQALNTKPKKEKTSKAERRALQEAQRAAKAAAKAEGNKASGTLASVNVKPAKAAKPPQKVDNVSVAASEKKGGDRPQEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPAFYKVGLQYLSGDVTGGNARCIAMLQAFQEAIKDYRVPSEKTLVRDLTAKLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESESKTSLQSDVERFINEKIILANKVIVKHVITKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPRLRGKLLLRRLVEKGLSCTYTHINAVSYIMNEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHAFRVPVLVCCEAYKFHERVQHDSICSNELGDPDVISRVQSREDVNHLEAWANTENLQLLNLIYDATPSDYVSMIITDYGMVSATIKEDYLVAASKYLKCALCRAPLR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01178 648 MobiDBLite consensus disorder prediction 158 279 - -
Lapu1g01178 648 MobiDBLite consensus disorder prediction 1 106 - -
Lapu1g01178 648 Pfam Initiation factor 2 subunit family 332 622 IPR000649 GO:0044237
Lapu1g01178 648 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 41 626 - -
Lapu1g01178 648 MobiDBLite consensus disorder prediction 58 102 - -
Lapu1g01178 648 Gene3D - 428 631 IPR042529 -
Lapu1g01178 648 MobiDBLite consensus disorder prediction 175 196 - -
Lapu1g01178 648 MobiDBLite consensus disorder prediction 243 279 - -
Lapu1g01178 648 SUPERFAMILY NagB/RpiA/CoA transferase-like 316 627 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01178 Lapu-Chr1 24752967 24758602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01178 1 625 Eukaryotic Initiation Factors Gene Family AT5G38640 65.271 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01178 K03680 - gmx:100785938 1019.22