Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01168 ATGGCTCTGGACCAGCCCTCCAATCCCAACGCCGTTGACGGGGCCGGTAACGGCGCCACGCCGTGCTCCGCCGCTGACGGAGGCGACGACGGGAGGCCGGCGGTGAGGCTGCCGCGGTGGACGCGGCAGGAGATTCTGGTGCTGATTCAGGGGAAGAGCGACGCGGAGAACCGGTTTAGACCGGGTCGGGGGAGCGGTTCGGCGTTCGGTTCGAGCGAACCGAAATGGGCGCTGGTCTCCGCGTACTGCAAGAAGCACGGCGTGAACCGGGAGCCGGTGCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCGCAGGTCAGGGACGAAACGGAGTCGTTTTGGCTCATGAGGAACGATTTGAGGAGGGAGAGGAAATTGCCCGGTTATTTTGACAGGGAGGTGTATAATATTCTCGATTCGCCGTCCACGGCGGCTGCAGCGACGGCGGAGAATCGAACGCCGGCGGTGGAGGCGGCGGGGGATGAGGAAGTGCACCTGTACGATAGTAATCGGAGAGTTGGGAGTGATGATGGGTTGTTCTCTGATTGTGAGAAGGAGGATATTTTGCTTTTAGCCCCTGCCAAAGATGTTCCTGCACCTGTTCCAATCTCAGAGAAACAATTTCAGCCGCTCCTTCAACTGTGTGAAGGTGAAGGCGATGCTCAAGGTACTACCAATGAGAAACGGGCAACCCCTAATCCAGAAATGGGTTCTACATCTCAAGGGGGACGGAAGAGGAAGCGATTTTCAACTGATGCAGAGGAGGAAAGTTTGCAAAGTCAATTAATTGATGTCCTAGAAAAGAATGGCAAAATGCTCCGTGACCATCTTGAAGCTCAGAACACCAATTTCCAATTGGACCGCCAACAGCAGAAAGACACTGCAACTAACATAGTTGCTGTACTTGATAAGCTTGCTGATGCTCTAGGGAGAATTGCTGATAAATTGTAG 981 0.5505 MALDQPSNPNAVDGAGNGATPCSAADGGDDGRPAVRLPRWTRQEILVLIQGKSDAENRFRPGRGSGSAFGSSEPKWALVSAYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDREVYNILDSPSTAAAATAENRTPAVEAAGDEEVHLYDSNRRVGSDDGLFSDCEKEDILLLAPAKDVPAPVPISEKQFQPLLQLCEGEGDAQGTTNEKRATPNPEMGSTSQGGRKRKRFSTDAEEESLQSQLIDVLEKNGKMLRDHLEAQNTNFQLDRQQQKDTATNIVAVLDKLADALGRIADKL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01168 326 Pfam Myb/SANT-like DNA-binding domain 39 126 IPR044822 -
Lapu1g01168 326 MobiDBLite consensus disorder prediction 234 250 - -
Lapu1g01168 326 Gene3D - 40 108 - -
Lapu1g01168 326 MobiDBLite consensus disorder prediction 228 265 - -
Lapu1g01168 326 MobiDBLite consensus disorder prediction 1 36 - -
Lapu1g01168 326 CDD GT1 38 110 - -
Lapu1g01168 326 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 6 326 - -
Lapu1g01168 326 ProSiteProfiles Myb-like domain profile. 32 103 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01168 39 111 Trihelix Transcription Factor Family AT1G33240 34.247 9.42e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu1g01168 Myb_DNA-bind_4 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01168 - - gmx:100788594 579.326