Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu1g01166 | ATGTTTAGGAAAAGGCACATCGCTTCTTCTCTTGCTAGGGAATTGTTGGCACTCCAGCCACTTTTTATTCTCTTCCTGTTCAGCTTGCACCACAACACTGTGCAATGTCAAGGAAGGTTGAGTAAACATGTTTCTTCAGAACCTCCCTCACCTTCTAGGCCATCACCACCGTCATCATCAGGATACAAGGATGACCCCAAGAAGATAATTTTGAGCTTGGTTTTAGGAGCAGTCACTGGACTAGTTTGTTCTGTTCTCTTTGCACTCGTGGTACGTTGCGTGGTGCAGTACCTGAACCGCACACCAATCCTCAAGGGACCTGTCATATTCTCCCCCAAAATTGCCCCCAAGACACTCCAATCAGCTTTGGCGAAGGAAAACCACTTGCTTGGTTCGAGTCCTAATGGAAAATACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTCAAAAGGCTAGCTCCCTTTGAGAGCAACGCTCCAGAGGTTAAGAGAAAATCAGTGAAGAGGCTGATACAAACTGAGCTAGAGCTTCTTGCAAGCTTGAGACACAGGAACTTGATGAGTTTGAGGGCCTATGTTCGTGAGCCTGATGGTTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTCGCTGATGTGATTAAAAGAGTGTGGGAGAACGAGTTGCCCTTTGGTTGGGAAGTTAGGCTCAGAATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACTTGTGTGCCTCAGATTCTGCACTGCAATTTGAAGCCAACAAATGTGATGTTGGATGGTGAGTTTGAACCCAGATTAGCAGACTATGGATTGGCCAAACTTCTACACAACTTGGATAGAGGAACATCTCTCTACACCCCTCCCGAGTGTTTCCACAATTGCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACGGGTAAGGACCCTACAGATCCTTTCTTTGGAGAAGCAGGCAGTGGGGGAAGTTTGGGATGTTGGCTGAGACACTTGCAGCAAGCTGGTGAGGCACGCGATGCCCTAGATAAGAGCATGTTAGGGGAAGAAGGGGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCTTGTCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGACGAACTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA | 1221 | 0.4644 | MFRKRHIASSLARELLALQPLFILFLFSLHHNTVQCQGRLSKHVSSEPPSPSRPSPPSSSGYKDDPKKIILSLVLGAVTGLVCSVLFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLAPFESNAPEVKRKSVKRLIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVIKRVWENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHCNLKPTNVMLDGEFEPRLADYGLAKLLHNLDRGTSLYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAGSGGSLGCWLRHLQQAGEARDALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF* | 407 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu1g01166 | 406 | MobiDBLite | consensus disorder prediction | 40 | 63 | - | - | |
Lapu1g01166 | 406 | ProSiteProfiles | Protein kinase domain profile. | 124 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu1g01166 | 406 | FunFam | Inactive leucine-rich repeat receptor-like protein kinase CORYNE | 116 | 207 | - | - | |
Lapu1g01166 | 406 | Gene3D | Transferase(Phosphotransferase) domain 1 | 208 | 405 | - | - | |
Lapu1g01166 | 406 | SUPERFAMILY | Protein kinase-like (PK-like) | 127 | 400 | IPR011009 | - | |
Lapu1g01166 | 406 | CDD | STKc_IRAK | 130 | 403 | - | - | |
Lapu1g01166 | 406 | Pfam | Protein kinase domain | 126 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu1g01166 | 406 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 31 | 402 | - | - | |
Lapu1g01166 | 406 | FunFam | Inactive leucine-rich repeat receptor-like protein kinase CORYNE | 208 | 405 | - | - | |
Lapu1g01166 | 406 | Gene3D | Phosphorylase Kinase; domain 1 | 111 | 207 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu1g01166 | Lapu-Chr1 | 24641318 | 24644548 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu1g01166 | 34 | 403 | Receptor kinase-like Gene Family | AT2G31880 | 32.039 | 8.42e-62 | 209 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-2 | Lapu1g01166 | Pkinase | 2.7e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu1g01166 | - | - | vra:106759565 | 729.939 |