Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01162 ATGACCATGGTTCCTTCTCAAAACGGGAAACATCAGAACATTAATAGGAGTGGTGATTATGTTATTTACGGTAACACAACGACGAGTAGTGCGATGAACCAGGTTATTGAAGTTGAAGGAGGCTACAATTGCTTATTAGGATCTGATTTTGTGGTGAGGAGGCACATCATGGCTGAGGCTGAAGAATCATCCAGACACAACAACAACAACGAGGAAGCTGAAGCTGGTGGCTGTGGTTCAACCTCTAAGGATGAAGAAGTAGAAGGAGCAAACAACAACACCAACAACAATAACAACAATAACTGGCTTCAATTAAGCATAGGTTTGACAAGCACAAAGCAAGACCGTGATCGAACCGTTCCAACAACAATCGGTTCAGGGCCCGTGGAGTTAGACTTTCTGTCCTCACGGCGGAGTTTCGATCTGCCGCCGGCTTTTTTTCCGGTGGCAGCTTCCGGGAGAGGAGGAGGAGGGTCTAGTTTTGGTGGTTCTTCTTCTTTGCTTTTTGAGCATCAAACGACGTCGTCTTCTTCCATGTCCATGTCTATGGCTAGTGGTCCAATTACCTCAACCTTTGGTCATCAAGAGATGATGAACTGGGCATTTGGTCCACTACTTCCTCATTCTATGCCTATTATGCCCTCTTCTTCCTCTTTCACTCCTCTTCCACCTCCTCCTTCTTCATCTTCTTCTTCCTCTTCACAACCTTGTTACTCCTCTTTGAGGCCTCCCTTAGGATCGTACTTTCCCACACCCTTTCATCACTTCCCTTCTTCTTCTTCTGGGTTTGATCAATATGACGTGGCTGCGGCAGGACCAAGCTCCGATGTCACTGTTCGAGTTGTTGATCCTCCTAGAAGACCTCATTCTGGAATATGGTTTATGTTACAAGCCTCTCAAAATCAAACGAAAGAACCATTCTTGCCACAAATACCTAAGAACTACCTTAGAATTAAAGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGACTGGAAAGCGAATCAGAGATAGAGATAACATGCAGAGGGCAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGAGTCCCAGAGACACCACAAGAGCTTTGCTTTCAGATTCCTCAACCTCAGATCATGTCATGGTGCTCCATTATGGTAGAACCACTGCTTAA 1191 0.4509 MTMVPSQNGKHQNINRSGDYVIYGNTTTSSAMNQVIEVEGGYNCLLGSDFVVRRHIMAEAEESSRHNNNNEEAEAGGCGSTSKDEEVEGANNNTNNNNNNNWLQLSIGLTSTKQDRDRTVPTTIGSGPVELDFLSSRRSFDLPPAFFPVAASGRGGGGSSFGGSSSLLFEHQTTSSSSMSMSMASGPITSTFGHQEMMNWAFGPLLPHSMPIMPSSSSFTPLPPPPSSSSSSSSQPCYSSLRPPLGSYFPTPFHHFPSSSSGFDQYDVAAAGPSSDVTVRVVDPPRRPHSGIWFMLQASQNQTKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLRLESESEIEITCRGQQLLPFLTLQHVRDNIWSPRDTTRALLSDSSTSDHVMVLHYGRTTA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01162 396 Gene3D - 285 391 - -
Lapu1g01162 396 MobiDBLite consensus disorder prediction 85 101 - -
Lapu1g01162 396 MobiDBLite consensus disorder prediction 61 101 - -
Lapu1g01162 396 MobiDBLite consensus disorder prediction 215 239 - -
Lapu1g01162 396 PANTHER RING FINGER PROTEIN 1 394 IPR044171 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01162 Lapu-Chr1 24601486 24610741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01162 305 392 C3H Transcription Factor Family AT3G23060 36.957 2.13e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01162 - - gmx:102664960 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01162 1 24601486 24610741 Lapu1g01162 1 24601486 24610741 ECH