Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01157 ATGGCAGATGCTGTTGTTGCCTTTCTGCTAAAGAACTTGTCGCGTCTTCTTGAGGATGAATTCACACTGCATTCTGGCGTGGAGGACAAAATCAACTCCCTCTGCAATGAGCTCAAGTTTATAGACATCTTCCTCAAGAGTTGTGAGGGCAAGTGCAACGACAAAGTTGTGAGAGAAGTGGTATGCCAAATAAGAGATGTGGCATACAAAGCTGAAGATGTGGTTGACACCTACGTTGCCAACATCACCAAACACAACACCAGAAACCCACTTAGCCAGTTATTCCACTTCAAGGAACGATTCATGGTGCTTCACAAAGTCAACGCTGACATAGAGACGATCAAGAACCGTATTGAAGAGATTTACAGGAACAAGGAGAGGTATGACATCAGAGAAGGTGAATTCCAGAGTGAAGAAGCTGCTGCAGCAGAATCACTCCGCAAGAGAAGGAGGGATGTGGAGGAAGAAGATGTGGTTGGCTTAGTGTATGACTCCAGGTTTGTAATTCAGCAACTCATCATGGAAAGCGATTCACGTCGTAAAGTTGTTTCAATAATCGGAATGGGAGGGTTGGGCAAGACTACTCTTGCCAGAAAGATCTATAGCAACAATCAGGTGAATGAATTGTTTACTAGTCGTGCATGGGGTTTTGTGTCCAACGATTATAGGGCTAGAGAGCTTTTGCTGAGCCTTCTCAAGTGTTTGCTGTCCATGTATGAATATAATGATTTATTCAAGAAAACTACGGATGGAGGTGAAGAATTAAGTGAGGAAGAACTGAAGATGAAGGTAGCAGAAAGGTTGAAGGGGAAGAAGTACCTGGTAGTGCTTGATGACATATGGGAAACCCAAGTATGGGACGAGGTTAAAGGTGCTTTTCCAGATGACCAAACAGGAAGCAGAATACTAATAACAAGTCGTGACAAGGAGGTGGCGCACTATATAGGAACAACTTCCCCCTACTACCTTCCCTTCCTCAATAAAGATGAAAGTTGGGAACTCTTCTCTAAGAAGGTGTTTAGAGGTGAAGAATGCCCTTCTAATCTAGAGCCTCTGGGTAGATCCATCGTTGAGAGTTGCGGGGGTTTACCACTTGCCATAGTTGTTTTGGCAGGAGTTGTTGCCAGGAAGGAGAAGTCAGAAAGAGAGTGGAAGAGGATGAAGGAAGTGAGTTGGCATCTCACACAAGACAAGACTCAAGTAATGGACATACTGAAGCTTAGCTATGACAACTTGCCTCCAAGATTAAAGCCGTGCTTTCTGTATTTTGGAATCTATCCTGAAGACTATGAGATCAGTGCAAGGCAATTGATCCAACTATGGACAGCCGAAGGCTTCATTCATCCACAAGAAACTGGAACCTCGAGTACTGCGGAGCTGGAAGATATTGGTGACTACTACTTGGATGAGCTGGTGGATCGCAGCCTGGTGCAAGTGGCAGCTAGGAGGAGTGACGGTGGTGTCAAGACATGCCGGATTCATGATCTTCTCCGTGATCTCTGCATATCAGAGAGCAAATCCAATAAGTTTTTTGAGGTTTACACAGACGTAAACATTGATACTCTATCCTTGAGCAATCCTCGTAGACTGTCCTTGCAATGCAAAGCACGGTCTAATATTTGTACAAACAAATTTAATCGATCATACACTCGTTCCTTGTTCTCATTTTCTGAAGTTATGCACACGCGTGGCTTTCCAAAGAGTATCAAGAATGCTCGTGTGCTATATTCAAAGTCCAAAGGAGAAATGAATTATTCACTACATGGTACTTTTAAGACGATGATCCATCTAAGGTATTTGAGAATAGACACAGGTGTCAGCCACATTCCAGCTTCCATAGGCAACCTTAGGAATTTAGAAACGCTAGATGTAAGATACAAAGAGACTGTCTCGAGTGAAATTTGGAAGCTGAAGCAACTGAGACATCTTTATTTGAGAGGGGGAGCAAAGTTACCAGAAGTAGATAGAGAGAGGAAGGTGAATCTTCAAACTCTCTGGTTAAGGGCTTTTGACCGACAAATGGTGTTCATGCTGAACAAGGACATGTTTGTCAATGACATATTTCCCAGGTTGAGAAAGCTGGTTTTGCACTATCCATTTCATCGTCCTTCCCACGAAAAATTACCAACTGTAAGGTTACCAAGCCTGCACCACCTAAGCAATCTCCATAGCCTAAAAGTAATTGACTTTCTAGAACTTCCACCAGACAAAGATGCCTTTCCATCACATCTCACCAAGATAACCTGGAAACAAATACATGTGGGCAAAGACTTCTCTTTGATGAATACTCTAGGATGGCTTTCCAACCTCCAAATTTTGAAAATAGGAAGACAACGTTCTGAAGTTTTGTTCGACCTTAATGTTGGTGCAGGACAGTTCCCACAACTTCAAGTATTTCAGATGAGGGGAATGAAAGTCAGAAGCTGGAGATTAGACAAAAGTGCAATGCCAAATCTTCAACATCTTCTCATTGAAGGCTGTGAATACTTATATAATCTTCCTAAACAACTCTGGTCCTTAACTACATTACGAGAAGTGCATGCTCTGTGGCCCTCTGAAAAATTGGCGAACAGACTTCAACATGTGAAATTAAAAAATGGTTGTAAGCTCATAATCTCTCACGCTCCTCCAAGTGGTTAA 2640 0.4269 MADAVVAFLLKNLSRLLEDEFTLHSGVEDKINSLCNELKFIDIFLKSCEGKCNDKVVREVVCQIRDVAYKAEDVVDTYVANITKHNTRNPLSQLFHFKERFMVLHKVNADIETIKNRIEEIYRNKERYDIREGEFQSEEAAAAESLRKRRRDVEEEDVVGLVYDSRFVIQQLIMESDSRRKVVSIIGMGGLGKTTLARKIYSNNQVNELFTSRAWGFVSNDYRARELLLSLLKCLLSMYEYNDLFKKTTDGGEELSEEELKMKVAERLKGKKYLVVLDDIWETQVWDEVKGAFPDDQTGSRILITSRDKEVAHYIGTTSPYYLPFLNKDESWELFSKKVFRGEECPSNLEPLGRSIVESCGGLPLAIVVLAGVVARKEKSEREWKRMKEVSWHLTQDKTQVMDILKLSYDNLPPRLKPCFLYFGIYPEDYEISARQLIQLWTAEGFIHPQETGTSSTAELEDIGDYYLDELVDRSLVQVAARRSDGGVKTCRIHDLLRDLCISESKSNKFFEVYTDVNIDTLSLSNPRRLSLQCKARSNICTNKFNRSYTRSLFSFSEVMHTRGFPKSIKNARVLYSKSKGEMNYSLHGTFKTMIHLRYLRIDTGVSHIPASIGNLRNLETLDVRYKETVSSEIWKLKQLRHLYLRGGAKLPEVDRERKVNLQTLWLRAFDRQMVFMLNKDMFVNDIFPRLRKLVLHYPFHRPSHEKLPTVRLPSLHHLSNLHSLKVIDFLELPPDKDAFPSHLTKITWKQIHVGKDFSLMNTLGWLSNLQILKIGRQRSEVLFDLNVGAGQFPQLQVFQMRGMKVRSWRLDKSAMPNLQHLLIEGCEYLYNLPKQLWSLTTLREVHALWPSEKLANRLQHVKLKNGCKLIISHAPPSG* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01157 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 423 IPR027417 -
Lapu1g01157 879 CDD RX-CC_like 2 121 IPR038005 -
Lapu1g01157 879 Pfam Rx N-terminal domain 5 87 IPR041118 -
Lapu1g01157 879 Coils Coil 104 131 - -
Lapu1g01157 879 Gene3D - 415 503 IPR036388 -
Lapu1g01157 879 SUPERFAMILY L domain-like 483 844 - -
Lapu1g01157 879 Gene3D - 1 128 - -
Lapu1g01157 879 Gene3D - 325 413 IPR042197 -
Lapu1g01157 879 PRINTS Disease resistance protein signature 182 197 - -
Lapu1g01157 879 PRINTS Disease resistance protein signature 614 630 - -
Lapu1g01157 879 PRINTS Disease resistance protein signature 360 374 - -
Lapu1g01157 879 PRINTS Disease resistance protein signature 267 281 - -
Lapu1g01157 879 Gene3D - 143 319 IPR027417 -
Lapu1g01157 879 FunFam Probable disease resistance protein At1g63360 409 503 - -
Lapu1g01157 879 Pfam NB-ARC domain 168 411 IPR002182 GO:0043531
Lapu1g01157 879 Gene3D Ribonuclease Inhibitor 579 864 IPR032675 -
Lapu1g01157 879 PANTHER DISEASE RESISTANCE PROTEIN RP 45 801 IPR044974 GO:0006952
Lapu1g01157 879 FunFam Probable disease resistance protein At1g61300 140 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01157 Lapu-Chr1 24517848 24520529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01157 162 500 WRKY Transcription Factor Family AT5G45050 25.439 5.86e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01157 - - gmx:100801950 1510.74