Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01146 ATGGATTCTTCTTCTACTTCGATCTCTCACTTCAGAGTCTCTGCGAATTCGTTCCTCTCTCAATACGAACCGCTTGCTCTGCTTCTTCTTCCTCTCCTTTCTCTCCTTCTCGCTCACTCGCTTCGCTCCTTCTTACGCCTACTTTCCGAGAACGGACTCAAAGCCACGCTCCTAGGGTTTTTCATGAACGCCATCAAATTGGTTCCTGGCGTGAAGGCCTACATAGATGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAATCTGATAGCAAATCTAAAAGAGAAGGTTGGAATACTGAGTTGCCAAGCACAGGATTAGGGACGTCTGTCCTTCAGAAAATGAGAGAGGAAAAAATTAATGATCCGGTCTGGCAAGGCAAATGCTCCGGTACAGTCTACATTGGAGGAAGTGAATCTGATGGACATTTTTCTGTGATAAATGAGGCATGCTCAATGTTTGCACATACCAATCCCCTGCATTTGGATGTATTCAAGAGTGTTGCACGCTTTGAAGCAGAAGTGGTTGCAATGACAGCGGCATTTCTTGGAAGTAAGGAAAATAGTTCTGGAGGACAAATATGTGGCAACATGACATCAGGCGGGACTGAAAGTATATTATTAGCTGTCAAATCATCTCGTGACTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATTATTCCCTTGTCTGGACACTCGGCATATGACAAGGCTGCACAGTATTTTAATATCAAACTATGGCGCGTACCAGTTAACAAGAATTTTCAAGCGGATGTGAAAGCTATTCGACGCCATATTAACAAAAATACTATCTTGATTGTTGGATCTGCTCCTGGGTTTCCTCATGGAATAATTGATCCCATCGAAGAACTTGGTCATCTGGCATCAAGCTTTGGTATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCATTTGCTCGTGAGCTTGGGTACCCGATTCCACCTTTTGATTTTTCTGTTGAAGGGGTTTCTTCAATATCAGTGGATGTACATAAATATGGTTTAGCTCCCAAAGGAACAAGTATAGTTCTTTATAGAAACCATGAAATCAGAAAGCATCAATTTGTTGCTGTCACTGAGTGGTCTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAAGTCTAATAGCTGGTGCGTGGGCGGCAATGATTTCTCTTGGGAAAGAAGGTTACTTGAAAAATACAAAAGCAATTATGGAAGCGTCAAGAAGAATACAGAAAGGCATAGAGGAGATTGCTGAGTTGTTTATTGTTGGAAAACCCGACATGACAATCGTGGCTTTGGGATCTGATGTTCTGGACATATTTGAAGTCAATGATGTTATGTCATCCAAAGGGTGGCATTTGAATGCATTACAGAGACCCAACAGCATCCATATCTGTGTTACACTGCAACATGTGCCAATTGTTGAAGACTTTCTCAATGATTTGAAGGAATCTGTGAAAACTGTGAAAGAAAATCCAGGTCCAATAAGTGGAGGCCTGGCACCTATATATGGCGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTATATGGACGGTACCTGCTAA 1620 0.4265 MDSSSTSISHFRVSANSFLSQYEPLALLLLPLLSLLLAHSLRSFLRLLSENGLKATLLGFFMNAIKLVPGVKAYIDAEKQKVVDKLQSDSKSKREGWNTELPSTGLGTSVLQKMREEKINDPVWQGKCSGTVYIGGSESDGHFSVINEACSMFAHTNPLHLDVFKSVARFEAEVVAMTAAFLGSKENSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPLSGHSAYDKAAQYFNIKLWRVPVNKNFQADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGHLASSFGICFHVDLCLGGFVLPFARELGYPIPPFDFSVEGVSSISVDVHKYGLAPKGTSIVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMISLGKEGYLKNTKAIMEASRRIQKGIEEIAELFIVGKPDMTIVALGSDVLDIFEVNDVMSSKGWHLNALQRPNSIHICVTLQHVPIVEDFLNDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01146 539 FunFam Sphingosine-1-phosphate lyase 1 499 538 - -
Lapu1g01146 539 FunFam Sphingosine-1-phosphate lyase 1 390 502 - -
Lapu1g01146 539 Gene3D - 136 403 IPR015421 GO:0003824
Lapu1g01146 539 Gene3D Aspartate Aminotransferase, domain 1 108 502 IPR015422 GO:0003824
Lapu1g01146 539 SUPERFAMILY PLP-dependent transferases 75 502 IPR015424 -
Lapu1g01146 539 Gene3D - 99 536 - -
Lapu1g01146 539 PANTHER - 37 539 - -
Lapu1g01146 539 FunFam sphingosine-1-phosphate lyase 1 139 403 - -
Lapu1g01146 539 Pfam Pyridoxal-dependent decarboxylase conserved domain 167 443 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01146 155 499 Calmodulin-binding Proteins AT3G17760 26.503 3.77e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01146 K01634 - gmx:100794395 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01146 1 24430267 24436335 Lapu1g01146 1 24430267 24436335 ECH