Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01132 TCCTCCGAAGTGGACGAAGAAGAATGTTGTTTGAATGTTTCAAGTGATGACGATTGTGAGAATGAATATGTACATAACTCTAAAGAAAAGAAAGATATAGCAGGATTATTTAAAGCTGAAGAAAGTAGGGATTTCTCATATATGGTTGAGGTTTTAACCGAGGCAGGTATATTTAATAGGAGCTTGTTTACAGACTTTTCTACATGGCACTCTCCACAATGTCCTATTACCCCTTCTGTCTTTGAAACCCTGGAAAAGAAATTTGGCGAACAGAAACTTTGGAGAAGATCCGAAAGAAAATTGCTCTTTGATCGCATTAACTCTGGGTTGCTACAGATTCTTCAGCCATATTTCTATATTCCAATGTGGGAAAAGTCAACATCAAGAAGATTGAATGCTGAACTAAGCCAGGACATGATTGAAGATGAGATGTGGGGATTGCTTGTTGCAGATGAAAAAAAAGTCAGTCATGAATTACCAGACAATACACTCGGAGGGAAAATTAGATGGATAGAACTAGTTGAAAATGTTGAAAATATTGTTACCGAGATAGTTACGTTGTTAACAGAGGAACTTGCAAACGAGATAGTTACCTGA 597 0.3702 SSEVDEEECCLNVSSDDDCENEYVHNSKEKKDIAGLFKAEESRDFSYMVEVLTEAGIFNRSLFTDFSTWHSPQCPITPSVFETLEKKFGEQKLWRRSERKLLFDRINSGLLQILQPYFYIPMWEKSTSRRLNAELSQDMIEDEMWGLLVADEKKVSHELPDNTLGGKIRWIELVENVENIVTEIVTLLTEELANEIVT* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01132 198 PANTHER AFADIN 3 197 - -
Lapu1g01132 198 Pfam Domain of unknown function (DUF4378) 44 195 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01132 Lapu-Chr1 24358340 24359570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01132 11 198 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 34.211 3.32e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01132 - - vun:114185209 316.235