Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01119 ATGGCGGATACGATTGTGGTGTTCCTCATAGACAAATTGACCAGGCTACTGGTGGAGGAAGCCAAACTTCTCGCCGGCGTGCGCGAGAAAGTGACCCTGTTGCAGAGCGAGCTCAGGTTCATGAATCTCTTCCTCAGGAACTCCCAAGGGAAGCGCAAAGAGCATGACATGGTCGCAGAACTCGTCAACCAGATCAGAGACGTCGCTCACGAAGCCGAAGACGTCATCGACACCTACGTCGCCGCCATCATCAAACAAAGCCGGAAAAACATGATCGGGAAAGTCGGTTTTCGCGGCGTAGACCACGCGTTCATGCTTCACCAGGTGGCCGTGAAGATCGACGGGATTAAGGCCAGAATCAACGAGATCTTCAGCAACAGAGAGAGATACGGCATCGAAGATGGAAGGAGGGGCAGCGAAGAGGAGGCAGAGCGGATTCGGAAGCAGAGAAGGGAGGTGGAGGAAGAAGAGGTTGTAGGGTTTGCGCACGACTCCAAGCTTGTGATTGAGAAACTCATGGTATCGGATTCTCGCCTTAAAGTTGTTTCAATCATCGGTATGGGTGGTTTGGGAAAAACCACGCTTGCTCGTAAGATATATAACTCTAACCGAGTGAAGAACATGTTTCCTTGTCGCGCGTGGGGTTATGTCTCTAATGATTATCGACCCAGGGAGTTTTTCTTAAGTCTTCTCAAGTGTTTGCTGTCCACGCCCAAGTACAACAGTCTGTTCAAGAAAAGAGAAGAGACGAGTGTGAGTGATGAAGAGCTGAAGATGAAGGTGCGAGAATGCTTGAACAGAAGCAAGTACTTGGTGGTTGTGGACGATGTTTGGCAGAAACAGGTGTGGAATGAGGTTAAAGGGGCATTTCCTGATGACCAAAATGGAAGCAGAATATTGATGACTACTCGTGGGGCTGAGGTTGCTTCTCACGCAGGTCCTGTCCTTCCCTACACTCTCCCCTTCCTCACCAAAGAAGAAAGTTGGGAGCTTCTTTCCAAGAAGGTGTTCAGGGGAGAAGAATGTCCTTCTGATTTGGAGTCCCTGGGAAAGTTGATTGCTGAAAGCTGTGATGGGTTGCCACTTGCCATCATTGTCATGGCAGGGATTTTGGCTAACAAGAAGTCACCGAGGGATTGGTCTAGAATCAAGGACCATGTCAATTGGCATCTTGGGAGGGACAACACACTGAAGGACATACTGAAACTCAGCTATGACACCTTGCCCGCGAGGTTAAAGCCTTGCTTTCTATATTTTGGCATGTACCCTGAAGATTATAGAATCCCCGTGAAGCAGTTGATCCAGTTGTGGATATCCGAAGGGTTATTAACACAAGAAACTTGTGGAAGCCAAGACATACCCGAGCCGGAATACATTGCGGAAGAGTACTTGGATGAACTGGTGGATCGCAGCTTGATCCAAGTGGTAAGCAGAACCAATGATGGGGGGGTCAAAACATGTCGGATTCACGATCTTCTTCGCGACCTTTGCATATCCGAGAGCAGGGAAGACAAGTTTTTCGAGGTTTGTGGAGAGATTGATTTCCAAAACCTCAATAGTTGTCCCCGTAAGTTGTCTCTCCACGGTACTCTTTTTCATTTCTCTTCAAGTATCGAATCTGATTACGCCATCTCGGGGACGCGTTCCTTGTTATGCTTTGGGCAAGAGGTGTACAAGGTTAAGCCAAACCACTGGAGATGGCTTCTCAAGAGCTTCAGGTTGGCTCGCGTGTTGGATTTAGGACGAATGAATGTTAACTCAATACCCACCGATTTGGAGAAGCTCATTCATTTAAGGTACCTGAGAATACACTCTCATAATCTTGAAACTATTCCTCCTTCTATATGCAGATTGTGGAATCTAGAAACCTTGGATTTAAGAGGTTCGCCTATAAAATCTTTTTCTGGTGAATTGTGGCAACTTAAGCAACTAAGGCATCTTCTGATGTTTGGACCTGTGGGGCTGCCAGAAATGCCCTCAGAAGGTAAAACTATGTCCAATCTTCAAACCCTCTCAACCGTGGCTCTTGATCCACGCACAGCATCCTTGTTGGATAGTCGTAGATTCCCAAGGATGACAAAATTGGGTATACATTTCGAAAGACGTGACAAGTGCAATGCTCGTGTACAGTTACAGAACCTCCACCGCCTGAGCCATCTCCGGAAGCTGAAAGTGATAGGGACTACTGAGATTCCGCAAAATGCAAATTTCTTTCCTTCAAACATCACCAAGATATCCCTCACAAAGTTTGGTTTCTTCAACTCCACTGTCATGCATACGCTAGGAAAGCTTCCCAACCTTCAAGTTCTGAAATTGTCATCGCAGACAAATGATAATAGATTTGACCTGCATTGTGCGACGGGAGGGTTCCTTCAGCTTCAAGTGTTTGAGATGGTTGCAATCAAGGTCAAAATGTGGAGAGTAGACAGAGGTTCGATGCCACGTGTTCGTCGTTTAGTAGTCAGAAGCTGTAAATCCTTGACTCAGCTTCCAAAGGAAGTATGGTCTTTGACTTCCTTGCGGGAAGTGCAGGTCTTGTGGCCCTGTACCGAATTGGCAAAAGGACTGCAAAATTTGGTGACGAACAATGCGTGTAAGCTCGTTGTCTATCCTCTTTCACCAGATGATGAATTGGATTTTCTCTAA 2646 0.4686 MADTIVVFLIDKLTRLLVEEAKLLAGVREKVTLLQSELRFMNLFLRNSQGKRKEHDMVAELVNQIRDVAHEAEDVIDTYVAAIIKQSRKNMIGKVGFRGVDHAFMLHQVAVKIDGIKARINEIFSNRERYGIEDGRRGSEEEAERIRKQRREVEEEEVVGFAHDSKLVIEKLMVSDSRLKVVSIIGMGGLGKTTLARKIYNSNRVKNMFPCRAWGYVSNDYRPREFFLSLLKCLLSTPKYNSLFKKREETSVSDEELKMKVRECLNRSKYLVVVDDVWQKQVWNEVKGAFPDDQNGSRILMTTRGAEVASHAGPVLPYTLPFLTKEESWELLSKKVFRGEECPSDLESLGKLIAESCDGLPLAIIVMAGILANKKSPRDWSRIKDHVNWHLGRDNTLKDILKLSYDTLPARLKPCFLYFGMYPEDYRIPVKQLIQLWISEGLLTQETCGSQDIPEPEYIAEEYLDELVDRSLIQVVSRTNDGGVKTCRIHDLLRDLCISESREDKFFEVCGEIDFQNLNSCPRKLSLHGTLFHFSSSIESDYAISGTRSLLCFGQEVYKVKPNHWRWLLKSFRLARVLDLGRMNVNSIPTDLEKLIHLRYLRIHSHNLETIPPSICRLWNLETLDLRGSPIKSFSGELWQLKQLRHLLMFGPVGLPEMPSEGKTMSNLQTLSTVALDPRTASLLDSRRFPRMTKLGIHFERRDKCNARVQLQNLHRLSHLRKLKVIGTTEIPQNANFFPSNITKISLTKFGFFNSTVMHTLGKLPNLQVLKLSSQTNDNRFDLHCATGGFLQLQVFEMVAIKVKMWRVDRGSMPRVRRLVVRSCKSLTQLPKEVWSLTSLREVQVLWPCTELAKGLQNLVTNNACKLVVYPLSPDDELDFL* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01119 881 Pfam Rx N-terminal domain 6 88 IPR041118 -
Lapu1g01119 881 FunFam Probable disease resistance protein At1g61300 140 314 - -
Lapu1g01119 881 Gene3D - 410 499 IPR036388 -
Lapu1g01119 881 PANTHER DISEASE RESISTANCE PROTEIN RP 41 805 IPR044974 GO:0006952
Lapu1g01119 881 SUPERFAMILY L domain-like 488 844 - -
Lapu1g01119 881 Gene3D - 139 314 IPR027417 -
Lapu1g01119 881 FunFam Probable disease resistance protein At1g63360 405 499 - -
Lapu1g01119 881 Gene3D - 322 409 IPR042197 -
Lapu1g01119 881 Pfam NB-ARC domain 168 406 IPR002182 GO:0043531
Lapu1g01119 881 Coils Coil 136 159 - -
Lapu1g01119 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 419 IPR027417 -
Lapu1g01119 881 Gene3D Ribonuclease Inhibitor 570 867 IPR032675 -
Lapu1g01119 881 Gene3D - 6 118 - -
Lapu1g01119 881 CDD RX-CC_like 2 125 IPR038005 -
Lapu1g01119 881 PRINTS Disease resistance protein signature 762 778 - -
Lapu1g01119 881 PRINTS Disease resistance protein signature 181 196 - -
Lapu1g01119 881 PRINTS Disease resistance protein signature 264 278 - -
Lapu1g01119 881 PRINTS Disease resistance protein signature 357 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01119 Lapu-Chr1 24250134 24253376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01119 167 496 WRKY Transcription Factor Family AT5G45050 24.269 1.53e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01119 - - gmx:100780593 1072